Gene : Glyma.11G180300 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR33057:SF17 - GB Genomic Order:  1803
Name:  ? Glyma.11G180300 Secondary Identifier:  ? PAC:30527781
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G180300 0.5kb upstream 0.5kb upstream 1854 true Chr11: 24590403-24592256 Glycine max
Glyma.11G180300 0.5kb upstream 0.5kb upstream 500 false Chr11: 24590403-24590902 Glycine max
Glyma.11G180300 0.5kb downstream 0.5kb downstream 1854 true Chr11: 24590903-24592756 Glycine max
Glyma.11G180300 0.5kb downstream 0.5kb downstream 500 false Chr11: 24592257-24592756 Glycine max
Glyma.11G180300 1.0kb upstream 1.0kb upstream 2354 true Chr11: 24589903-24592256 Glycine max
Glyma.11G180300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 24589903-24590902 Glycine max
Glyma.11G180300 1.0kb downstream 1.0kb downstream 2354 true Chr11: 24590903-24593256 Glycine max
Glyma.11G180300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 24592257-24593256 Glycine max
Glyma.11G180300 2.0kb upstream 2.0kb upstream 3354 true Chr11: 24588903-24592256 Glycine max
Glyma.11G180300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 24588903-24590902 Glycine max
Glyma.11G180300 2.0kb downstream 2.0kb downstream 3354 true Chr11: 24590903-24594256 Glycine max
Glyma.11G180300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 24592257-24594256 Glycine max
Glyma.11G180300 5.0kb upstream 5.0kb upstream 6354 true Chr11: 24585903-24592256 Glycine max
Glyma.11G180300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 24585903-24590902 Glycine max
Glyma.11G180300 5.0kb downstream 5.0kb downstream 6354 true Chr11: 24590903-24597256 Glycine max
Glyma.11G180300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 24592257-24597256 Glycine max
Glyma.11G180300 10.0kb upstream 10.0kb upstream 11354 true Chr11: 24580903-24592256 Glycine max
Glyma.11G180300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 24580903-24590902 Glycine max
Glyma.11G180300 10.0kb downstream 10.0kb downstream 11354 true Chr11: 24590903-24602256 Glycine max
Glyma.11G180300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 24592257-24602256 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315278 5265 Fabidae View MSA
124070173 5270 Rosid View MSA
123748591 5271 Pentapetalae View MSA
122791158 5272 Eudicot View MSA
122048787 5273 Angiosperm View MSA
121311113 5274 Embryophyte View MSA
123348456 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.0822 0.0 3.94537    
cufflinks 2.9513 0.0 9.86224   High
cufflinks 0.264601 0.0 1.03063    
cufflinks 0.232296 0.0 0.908429    
cufflinks 0.139705 0.0 0.556718 Low Low
cufflinks 0.886443 0.0 3.26709    
cufflinks 0.161198 0.0 0.638926 Low  
cufflinks 0.73777 0.0 2.74082    
cufflinks 0.184408 0.0 0.727495 Low  
cufflinks 0.693        
cufflinks 0.097       Low
cufflinks 0.532        
cufflinks 0.156        
cufflinks 0.103       Low
cufflinks 0.201        
cufflinks 1.761       High
cufflinks 0.158        
cufflinks 0.803        
cufflinks 3.246       High
cufflinks 1.7        
cufflinks 0.497        
cufflinks 2.062       High
cufflinks 2.087       High
cufflinks 0.111       Low
cufflinks 1.596        
cufflinks 0.301        

0 Strain