Gene : Glyma.11G227300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24006:SF428 - CORONATINE-INSENSITIVE PROTEIN 1 Genomic Order:  2273
Name:  ? Glyma.11G227300 Secondary Identifier:  ? PAC:30528946
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G227300 0.5kb upstream 0.5kb upstream 4663 true Chr11: 32211891-32216553 Glycine max
Glyma.11G227300 0.5kb upstream 0.5kb upstream 500 false Chr11: 32216054-32216553 Glycine max
Glyma.11G227300 0.5kb downstream 0.5kb downstream 4663 true Chr11: 32211391-32216053 Glycine max
Glyma.11G227300 0.5kb downstream 0.5kb downstream 500 false Chr11: 32211391-32211890 Glycine max
Glyma.11G227300 1.0kb upstream 1.0kb upstream 5163 true Chr11: 32211891-32217053 Glycine max
Glyma.11G227300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32216054-32217053 Glycine max
Glyma.11G227300 1.0kb downstream 1.0kb downstream 5163 true Chr11: 32210891-32216053 Glycine max
Glyma.11G227300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32210891-32211890 Glycine max
Glyma.11G227300 2.0kb upstream 2.0kb upstream 6163 true Chr11: 32211891-32218053 Glycine max
Glyma.11G227300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32216054-32218053 Glycine max
Glyma.11G227300 2.0kb downstream 2.0kb downstream 6163 true Chr11: 32209891-32216053 Glycine max
Glyma.11G227300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32209891-32211890 Glycine max
Glyma.11G227300 5.0kb upstream 5.0kb upstream 9163 true Chr11: 32211891-32221053 Glycine max
Glyma.11G227300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32216054-32221053 Glycine max
Glyma.11G227300 5.0kb downstream 5.0kb downstream 9163 true Chr11: 32206891-32216053 Glycine max
Glyma.11G227300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32206891-32211890 Glycine max
Glyma.11G227300 10.0kb upstream 10.0kb upstream 14163 true Chr11: 32211891-32226053 Glycine max
Glyma.11G227300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32216054-32226053 Glycine max
Glyma.11G227300 10.0kb downstream 10.0kb downstream 14163 true Chr11: 32201891-32216053 Glycine max
Glyma.11G227300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32201891-32211890 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313234 5265 Fabidae View MSA
124062956 5270 Rosid View MSA
123749708 5271 Pentapetalae View MSA
122790201 5272 Eudicot View MSA
122042626 5273 Angiosperm View MSA
121349676 5274 Embryophyte View MSA
123381396 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.4276 0.0 57.5278   High
cufflinks 8.51707 0.0 23.1177    
cufflinks 23.7508 0.0 64.0362 High High
cufflinks 13.5072 0.0 36.0615    
cufflinks 14.5132 0.0 38.7215    
cufflinks 10.2707 0.0 27.6037    
cufflinks 5.52793 0.0 15.5275   Low
cufflinks 19.6393 0.0 52.5742    
cufflinks 14.5714 0.0 38.8761    
cufflinks 4.674        
cufflinks 10.636     High  
cufflinks 9.633     High  
cufflinks 3.267       Low
cufflinks 3.338       Low
cufflinks 6.285     High  
cufflinks 9.609     High  
cufflinks 2.317       Low
cufflinks 12.338     High  
cufflinks 5.132        
cufflinks 14.679     High High
cufflinks 15.374     High High
cufflinks 11.883     High  
cufflinks 5.488        
cufflinks 12.8     High  
cufflinks 11.942     High  
cufflinks 6.195        

0 Strain