Gene : Glyma.11G221500 G. max Wm82.a2.v1
Defline:  (1 of 91) PF13912 - C2H2-type zinc finger (zf-C2H2_6) Genomic Order:  2215
Name:  ? Glyma.11G221500 Secondary Identifier:  ? PAC:30530284
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G221500 0.5kb upstream 0.5kb upstream 1634 true Chr11: 31662583-31664216 Glycine max
Glyma.11G221500 0.5kb upstream 0.5kb upstream 500 false Chr11: 31663717-31664216 Glycine max
Glyma.11G221500 0.5kb downstream 0.5kb downstream 1634 true Chr11: 31662083-31663716 Glycine max
Glyma.11G221500 0.5kb downstream 0.5kb downstream 500 false Chr11: 31662083-31662582 Glycine max
Glyma.11G221500 1.0kb upstream 1.0kb upstream 2134 true Chr11: 31662583-31664716 Glycine max
Glyma.11G221500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 31663717-31664716 Glycine max
Glyma.11G221500 1.0kb downstream 1.0kb downstream 2134 true Chr11: 31661583-31663716 Glycine max
Glyma.11G221500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 31661583-31662582 Glycine max
Glyma.11G221500 2.0kb upstream 2.0kb upstream 3134 true Chr11: 31662583-31665716 Glycine max
Glyma.11G221500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 31663717-31665716 Glycine max
Glyma.11G221500 2.0kb downstream 2.0kb downstream 3134 true Chr11: 31660583-31663716 Glycine max
Glyma.11G221500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 31660583-31662582 Glycine max
Glyma.11G221500 5.0kb upstream 5.0kb upstream 6134 true Chr11: 31662583-31668716 Glycine max
Glyma.11G221500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 31663717-31668716 Glycine max
Glyma.11G221500 5.0kb downstream 5.0kb downstream 6134 true Chr11: 31657583-31663716 Glycine max
Glyma.11G221500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 31657583-31662582 Glycine max
Glyma.11G221500 10.0kb upstream 10.0kb upstream 11134 true Chr11: 31662583-31673716 Glycine max
Glyma.11G221500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 31663717-31673716 Glycine max
Glyma.11G221500 10.0kb downstream 10.0kb downstream 11134 true Chr11: 31652583-31663716 Glycine max
Glyma.11G221500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 31652583-31662582 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300108 5265 Fabidae View MSA
124072849 5270 Rosid View MSA
123747736 5271 Pentapetalae View MSA
122788735 5272 Eudicot View MSA
122049526 5273 Angiosperm View MSA
121348741 5274 Embryophyte View MSA
123380998 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.223069 0.0 0.87759 Low  
cufflinks 0.0276722 0.0 0.122486 Low  
cufflinks 0.0122133 0.0 0.0587217 Low Low
cufflinks 0.137788 0.0 0.55183 Low  
cufflinks 0.171521 0.0 0.681199 Low  
cufflinks 0.0401513 0.0 0.172928 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.43295 0.0 1.65716   High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.054     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.03     Low  
cufflinks 0.656       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.071        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  

0 Strain