Gene : Glyma.11G214500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22849:SF43 - U-BOX DOMAIN-CONTAINING PROTEIN 54-RELATED Genomic Order:  2145
Name:  ? Glyma.11G214500 Secondary Identifier:  ? PAC:30529875
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G214500 0.5kb upstream 0.5kb upstream 2235 true Chr11: 30798620-30800854 Glycine max
Glyma.11G214500 0.5kb upstream 0.5kb upstream 500 false Chr11: 30798620-30799119 Glycine max
Glyma.11G214500 0.5kb downstream 0.5kb downstream 2235 true Chr11: 30799120-30801354 Glycine max
Glyma.11G214500 0.5kb downstream 0.5kb downstream 500 false Chr11: 30800855-30801354 Glycine max
Glyma.11G214500 1.0kb upstream 1.0kb upstream 2735 true Chr11: 30798120-30800854 Glycine max
Glyma.11G214500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 30798120-30799119 Glycine max
Glyma.11G214500 1.0kb downstream 1.0kb downstream 2735 true Chr11: 30799120-30801854 Glycine max
Glyma.11G214500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 30800855-30801854 Glycine max
Glyma.11G214500 2.0kb upstream 2.0kb upstream 3735 true Chr11: 30797120-30800854 Glycine max
Glyma.11G214500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 30797120-30799119 Glycine max
Glyma.11G214500 2.0kb downstream 2.0kb downstream 3735 true Chr11: 30799120-30802854 Glycine max
Glyma.11G214500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 30800855-30802854 Glycine max
Glyma.11G214500 5.0kb upstream 5.0kb upstream 6735 true Chr11: 30794120-30800854 Glycine max
Glyma.11G214500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 30794120-30799119 Glycine max
Glyma.11G214500 5.0kb downstream 5.0kb downstream 6735 true Chr11: 30799120-30805854 Glycine max
Glyma.11G214500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 30800855-30805854 Glycine max
Glyma.11G214500 10.0kb upstream 10.0kb upstream 11735 true Chr11: 30789120-30800854 Glycine max
Glyma.11G214500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 30789120-30799119 Glycine max
Glyma.11G214500 10.0kb downstream 10.0kb downstream 11735 true Chr11: 30799120-30810854 Glycine max
Glyma.11G214500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 30800855-30810854 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311953 5265 Fabidae View MSA
124062447 5270 Rosid View MSA
123744256 5271 Pentapetalae View MSA
122789600 5272 Eudicot View MSA
122042359 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.1925 0.0 96.4785 High High
cufflinks 0.0343443 0.0 0.142419 Low Low
cufflinks 11.7162 0.0 31.4695   High
cufflinks 0.0380517 0.0 0.156705 Low Low
cufflinks 1.62041 0.0 5.44909    
cufflinks 11.168 0.0 30.0827    
cufflinks 0.0404157 0.0 0.165788 Low Low
cufflinks 0.193419 0.0 0.744197 Low  
cufflinks 0.99551 0.0 3.5053    
cufflinks 9.754     High  
cufflinks 412.465     High High
cufflinks 38.848     High  
cufflinks 21.207     High  
cufflinks 2.924        
cufflinks 104.289     High  
cufflinks 22.701     High  
cufflinks 198.194     High High
cufflinks 9.163     High  
cufflinks 0.368       Low
cufflinks 10.949     High  
cufflinks 222.752     High High
cufflinks 9.745     High  
cufflinks 1.876       Low
cufflinks 284.365     High High
cufflinks 2.571       Low
cufflinks 229.475     High High

0 Strain