Gene : Glyma.11G253500 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR11141 - PROTEIN TRANSPORT PROTEIN SEC23 Genomic Order:  2535
Name:  ? Glyma.11G253500 Secondary Identifier:  ? PAC:30530509
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G253500 0.5kb upstream 0.5kb upstream 7023 true Chr11: 34419085-34426107 Glycine max
Glyma.11G253500 0.5kb upstream 0.5kb upstream 500 false Chr11: 34419085-34419584 Glycine max
Glyma.11G253500 0.5kb downstream 0.5kb downstream 7023 true Chr11: 34419585-34426607 Glycine max
Glyma.11G253500 0.5kb downstream 0.5kb downstream 500 false Chr11: 34426108-34426607 Glycine max
Glyma.11G253500 1.0kb upstream 1.0kb upstream 7523 true Chr11: 34418585-34426107 Glycine max
Glyma.11G253500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34418585-34419584 Glycine max
Glyma.11G253500 1.0kb downstream 1.0kb downstream 7523 true Chr11: 34419585-34427107 Glycine max
Glyma.11G253500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34426108-34427107 Glycine max
Glyma.11G253500 2.0kb upstream 2.0kb upstream 8523 true Chr11: 34417585-34426107 Glycine max
Glyma.11G253500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34417585-34419584 Glycine max
Glyma.11G253500 2.0kb downstream 2.0kb downstream 8523 true Chr11: 34419585-34428107 Glycine max
Glyma.11G253500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34426108-34428107 Glycine max
Glyma.11G253500 5.0kb upstream 5.0kb upstream 11523 true Chr11: 34414585-34426107 Glycine max
Glyma.11G253500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34414585-34419584 Glycine max
Glyma.11G253500 5.0kb downstream 5.0kb downstream 11523 true Chr11: 34419585-34431107 Glycine max
Glyma.11G253500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34426108-34431107 Glycine max
Glyma.11G253500 10.0kb upstream 10.0kb upstream 16523 true Chr11: 34409585-34426107 Glycine max
Glyma.11G253500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34409585-34419584 Glycine max
Glyma.11G253500 10.0kb downstream 10.0kb downstream 16523 true Chr11: 34419585-34436107 Glycine max
Glyma.11G253500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34426108-34436107 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304077 5265 Fabidae View MSA
124061979 5270 Rosid View MSA
123740886 5271 Pentapetalae View MSA
122793280 5272 Eudicot View MSA
122046887 5273 Angiosperm View MSA
121348482 5274 Embryophyte View MSA
123424383 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.8478 0.0 62.92 High  
cufflinks 14.1639 0.0 37.9392   Low
cufflinks 22.081 0.0 60.5498 High  
cufflinks 25.7859 0.0 71.7178 High  
cufflinks 31.3987 0.0 89.5775 High High
cufflinks 13.7845 0.0 36.926   Low
cufflinks 27.7982 0.0 78.0209 High  
cufflinks 20.8451 0.0 56.9692    
cufflinks 19.8993 0.0 54.2499 High  
cufflinks 11.875     High  
cufflinks 10.267     High  
cufflinks 8.185     High Low
cufflinks 14.261     High High
cufflinks 17.198     High High
cufflinks 10.741     High  
cufflinks 9.972     High  
cufflinks 8.606     High Low
cufflinks 10.763     High  
cufflinks 11.006     High  
cufflinks 9.527     High  
cufflinks 11.446     High  
cufflinks 9.818     High  
cufflinks 9.446     High  
cufflinks 11.307     High  
cufflinks 9.689     High  
cufflinks 10.153     High  

0 Strain