Gene : Glyma.11G248900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12419//PTHR12419:SF24 - OTU DOMAIN CONTAINING PROTEIN Genomic Order:  2489
Name:  ? Glyma.11G248900 Secondary Identifier:  ? PAC:30528154
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G248900 0.5kb upstream 0.5kb upstream 2645 true Chr11: 34122539-34125183 Glycine max
Glyma.11G248900 0.5kb upstream 0.5kb upstream 500 false Chr11: 34124684-34125183 Glycine max
Glyma.11G248900 0.5kb downstream 0.5kb downstream 2645 true Chr11: 34122039-34124683 Glycine max
Glyma.11G248900 0.5kb downstream 0.5kb downstream 500 false Chr11: 34122039-34122538 Glycine max
Glyma.11G248900 1.0kb upstream 1.0kb upstream 3145 true Chr11: 34122539-34125683 Glycine max
Glyma.11G248900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34124684-34125683 Glycine max
Glyma.11G248900 1.0kb downstream 1.0kb downstream 3145 true Chr11: 34121539-34124683 Glycine max
Glyma.11G248900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34121539-34122538 Glycine max
Glyma.11G248900 2.0kb upstream 2.0kb upstream 4145 true Chr11: 34122539-34126683 Glycine max
Glyma.11G248900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34124684-34126683 Glycine max
Glyma.11G248900 2.0kb downstream 2.0kb downstream 4145 true Chr11: 34120539-34124683 Glycine max
Glyma.11G248900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34120539-34122538 Glycine max
Glyma.11G248900 5.0kb upstream 5.0kb upstream 7145 true Chr11: 34122539-34129683 Glycine max
Glyma.11G248900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34124684-34129683 Glycine max
Glyma.11G248900 5.0kb downstream 5.0kb downstream 7145 true Chr11: 34117539-34124683 Glycine max
Glyma.11G248900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34117539-34122538 Glycine max
Glyma.11G248900 10.0kb upstream 10.0kb upstream 12145 true Chr11: 34122539-34134683 Glycine max
Glyma.11G248900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34124684-34134683 Glycine max
Glyma.11G248900 10.0kb downstream 10.0kb downstream 12145 true Chr11: 34112539-34124683 Glycine max
Glyma.11G248900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34112539-34122538 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074941 5270 Rosid View MSA
122300144 5265 Fabidae View MSA
123749661 5271 Pentapetalae View MSA
122794711 5272 Eudicot View MSA
122048756 5273 Angiosperm View MSA
121349238 5274 Embryophyte View MSA
123428485 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.81023 0.0 36.363   High
cufflinks 0.50228 0.0 3.41308    
cufflinks 6.32618 0.0 30.9367   High
cufflinks 2.48226 0.0 20.8912    
cufflinks 0.676496 0.0 4.55371    
cufflinks 0.0518933 0.0 0.232915 Low Low
cufflinks 0.097137 0.0 0.400601 Low Low
cufflinks 4.75622 0.0 30.1323    
cufflinks 1.12371 0.0 6.97846    
cufflinks 0.228        
cufflinks 0.028     Low  
cufflinks 0.802       High
cufflinks 0.019     Low  
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.078     Low  
cufflinks 0.172        
cufflinks 0.814       High
cufflinks 0.034     Low  
cufflinks 0.087     Low  
cufflinks 0.037     Low  
cufflinks 0.198        
cufflinks 0.047     Low  
cufflinks 0.049     Low  
cufflinks 0.154        
cufflinks 0.035     Low  

0 Strain