Gene : Glyma.11G249900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR19321:SF3 - 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 8 Genomic Order:  2499
Name:  ? Glyma.11G249900 Secondary Identifier:  ? PAC:30531544
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G249900 0.5kb upstream 0.5kb upstream 4722 true Chr11: 34179770-34184491 Glycine max
Glyma.11G249900 0.5kb upstream 0.5kb upstream 500 false Chr11: 34179770-34180269 Glycine max
Glyma.11G249900 0.5kb downstream 0.5kb downstream 4722 true Chr11: 34180270-34184991 Glycine max
Glyma.11G249900 0.5kb downstream 0.5kb downstream 500 false Chr11: 34184492-34184991 Glycine max
Glyma.11G249900 1.0kb upstream 1.0kb upstream 5222 true Chr11: 34179270-34184491 Glycine max
Glyma.11G249900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34179270-34180269 Glycine max
Glyma.11G249900 1.0kb downstream 1.0kb downstream 5222 true Chr11: 34180270-34185491 Glycine max
Glyma.11G249900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34184492-34185491 Glycine max
Glyma.11G249900 2.0kb upstream 2.0kb upstream 6222 true Chr11: 34178270-34184491 Glycine max
Glyma.11G249900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34178270-34180269 Glycine max
Glyma.11G249900 2.0kb downstream 2.0kb downstream 6222 true Chr11: 34180270-34186491 Glycine max
Glyma.11G249900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34184492-34186491 Glycine max
Glyma.11G249900 5.0kb upstream 5.0kb upstream 9222 true Chr11: 34175270-34184491 Glycine max
Glyma.11G249900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34175270-34180269 Glycine max
Glyma.11G249900 5.0kb downstream 5.0kb downstream 9222 true Chr11: 34180270-34189491 Glycine max
Glyma.11G249900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34184492-34189491 Glycine max
Glyma.11G249900 10.0kb upstream 10.0kb upstream 14222 true Chr11: 34170270-34184491 Glycine max
Glyma.11G249900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34170270-34180269 Glycine max
Glyma.11G249900 10.0kb downstream 10.0kb downstream 14222 true Chr11: 34180270-34194491 Glycine max
Glyma.11G249900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34184492-34194491 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299715 5265 Fabidae View MSA
124065991 5270 Rosid View MSA
123736403 5271 Pentapetalae View MSA
122791435 5272 Eudicot View MSA
122046856 5273 Angiosperm View MSA
121350592 5274 Embryophyte View MSA
123428292 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.379554 0.0 1.38692   Low
cufflinks 1.94294 0.0 5.98545    
cufflinks 0.402673 0.0 1.46186   Low
cufflinks 3.78864 0.0 10.6885    
cufflinks 1.62745 0.0 5.15846    
cufflinks 8.30876 0.0 22.2629   High
cufflinks 0.621403 0.0 2.20111    
cufflinks 8.62904 0.0 23.0853   High
cufflinks 3.20744 0.0 9.24162    
cufflinks 3.254        
cufflinks 6.295     High High
cufflinks 0.577       Low
cufflinks 4.464       High
cufflinks 1.657        
cufflinks 0.678       Low
cufflinks 1.161        
cufflinks 1.701        
cufflinks 1.362        
cufflinks 2.672        
cufflinks 0.717       Low
cufflinks 2.603        
cufflinks 0.925        
cufflinks 0.943        
cufflinks 3.243        
cufflinks 0.848        
cufflinks 2.197        

0 Strain