Gene : Glyma.11G250100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32409:SF3 - MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED Genomic Order:  2501
Name:  ? Glyma.11G250100 Secondary Identifier:  ? PAC:30531521
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G250100 0.5kb upstream 0.5kb upstream 3844 true Chr11: 34185408-34189251 Glycine max
Glyma.11G250100 0.5kb upstream 0.5kb upstream 500 false Chr11: 34185408-34185907 Glycine max
Glyma.11G250100 0.5kb downstream 0.5kb downstream 3844 true Chr11: 34185908-34189751 Glycine max
Glyma.11G250100 0.5kb downstream 0.5kb downstream 500 false Chr11: 34189252-34189751 Glycine max
Glyma.11G250100 1.0kb upstream 1.0kb upstream 4344 true Chr11: 34184908-34189251 Glycine max
Glyma.11G250100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34184908-34185907 Glycine max
Glyma.11G250100 1.0kb downstream 1.0kb downstream 4344 true Chr11: 34185908-34190251 Glycine max
Glyma.11G250100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34189252-34190251 Glycine max
Glyma.11G250100 2.0kb upstream 2.0kb upstream 5344 true Chr11: 34183908-34189251 Glycine max
Glyma.11G250100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34183908-34185907 Glycine max
Glyma.11G250100 2.0kb downstream 2.0kb downstream 5344 true Chr11: 34185908-34191251 Glycine max
Glyma.11G250100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34189252-34191251 Glycine max
Glyma.11G250100 5.0kb upstream 5.0kb upstream 8344 true Chr11: 34180908-34189251 Glycine max
Glyma.11G250100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34180908-34185907 Glycine max
Glyma.11G250100 5.0kb downstream 5.0kb downstream 8344 true Chr11: 34185908-34194251 Glycine max
Glyma.11G250100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34189252-34194251 Glycine max
Glyma.11G250100 10.0kb upstream 10.0kb upstream 13344 true Chr11: 34175908-34189251 Glycine max
Glyma.11G250100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34175908-34185907 Glycine max
Glyma.11G250100 10.0kb downstream 10.0kb downstream 13344 true Chr11: 34185908-34199251 Glycine max
Glyma.11G250100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34189252-34199251 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026369 5273 Angiosperm View MSA
122310130 5265 Fabidae View MSA
124065101 5270 Rosid View MSA
123751692 5271 Pentapetalae View MSA
122795762 5272 Eudicot View MSA
121344161 5274 Embryophyte View MSA
123425894 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.6139 0.0 38.2059   Low
cufflinks 22.296 0.0 60.3031 High  
cufflinks 10.9299 0.0 31.339   Low
cufflinks 17.1866 0.0 47.2065    
cufflinks 23.4934 0.0 63.315 High  
cufflinks 24.0164 0.0 64.6541 High  
cufflinks 21.5733 0.0 58.4281    
cufflinks 22.5669 0.0 60.993 High  
cufflinks 26.2891 0.0 70.5624 High High
cufflinks 4.2        
cufflinks 2.204       Low
cufflinks 4.356        
cufflinks 6.703       High
cufflinks 10.017     High High
cufflinks 3.059        
cufflinks 2.663        
cufflinks 2.767        
cufflinks 5.508       High
cufflinks 5.132        
cufflinks 1.998       Low
cufflinks 2.527        
cufflinks 2.211       Low
cufflinks 3.507        
cufflinks 2.659        
cufflinks 2.855        
cufflinks 3.473        

0 Strain