Gene : Glyma.11G251900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR23335:SF1 - CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 4 Genomic Order:  2519
Name:  ? Glyma.11G251900 Secondary Identifier:  ? PAC:30529893
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G251900 0.5kb upstream 0.5kb upstream 8800 true Chr11: 34314109-34322908 Glycine max
Glyma.11G251900 0.5kb upstream 0.5kb upstream 500 false Chr11: 34322409-34322908 Glycine max
Glyma.11G251900 0.5kb downstream 0.5kb downstream 8800 true Chr11: 34313609-34322408 Glycine max
Glyma.11G251900 0.5kb downstream 0.5kb downstream 500 false Chr11: 34313609-34314108 Glycine max
Glyma.11G251900 1.0kb upstream 1.0kb upstream 9300 true Chr11: 34314109-34323408 Glycine max
Glyma.11G251900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34322409-34323408 Glycine max
Glyma.11G251900 1.0kb downstream 1.0kb downstream 9300 true Chr11: 34313109-34322408 Glycine max
Glyma.11G251900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34313109-34314108 Glycine max
Glyma.11G251900 2.0kb upstream 2.0kb upstream 10300 true Chr11: 34314109-34324408 Glycine max
Glyma.11G251900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34322409-34324408 Glycine max
Glyma.11G251900 2.0kb downstream 2.0kb downstream 10300 true Chr11: 34312109-34322408 Glycine max
Glyma.11G251900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34312109-34314108 Glycine max
Glyma.11G251900 5.0kb upstream 5.0kb upstream 13300 true Chr11: 34314109-34327408 Glycine max
Glyma.11G251900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34322409-34327408 Glycine max
Glyma.11G251900 5.0kb downstream 5.0kb downstream 13300 true Chr11: 34309109-34322408 Glycine max
Glyma.11G251900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34309109-34314108 Glycine max
Glyma.11G251900 10.0kb upstream 10.0kb upstream 18300 true Chr11: 34314109-34332408 Glycine max
Glyma.11G251900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34322409-34332408 Glycine max
Glyma.11G251900 10.0kb downstream 10.0kb downstream 18300 true Chr11: 34304109-34322408 Glycine max
Glyma.11G251900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34304109-34314108 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296987 5265 Fabidae View MSA
124064379 5270 Rosid View MSA
123737526 5271 Pentapetalae View MSA
122795651 5272 Eudicot View MSA
122049941 5273 Angiosperm View MSA
121311657 5274 Embryophyte View MSA
123348927 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.870493 0.0 2.92343    
cufflinks 0.516825 0.0 1.82737    
cufflinks 4.36479 0.0 11.9503   High
cufflinks 1.59965 0.0 4.9342    
cufflinks 0.131083 0.0 0.499864 Low  
cufflinks 0.0121711 0.0 0.0519908 Low Low
cufflinks 0.288116 0.0 1.05912    
cufflinks 1.22547 0.0 3.92779    
cufflinks 0.171832 0.0 0.64733 Low  
cufflinks 1.026        
cufflinks 0.158        
cufflinks 2.809       High
cufflinks 0.101       Low
cufflinks 0.065     Low Low
cufflinks 0.143        
cufflinks 1.078        
cufflinks 0.138       Low
cufflinks 2.632       High
cufflinks 0.593        
cufflinks 1.482        
cufflinks 0.284        
cufflinks 1.425        
cufflinks 0.756        
cufflinks 0.19        
cufflinks 1.481        
cufflinks 0.229        

0 Strain