Gene : Glyma.11G242000 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR21355:SF0 - LMBR1 DOMAIN-CONTAINING PROTEIN 2 Genomic Order:  2420
Name:  ? Glyma.11G242000 Secondary Identifier:  ? PAC:30529653
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G242000 0.5kb upstream 0.5kb upstream 10646 true Chr11: 33593209-33603854 Glycine max
Glyma.11G242000 0.5kb upstream 0.5kb upstream 500 false Chr11: 33593209-33593708 Glycine max
Glyma.11G242000 0.5kb downstream 0.5kb downstream 10646 true Chr11: 33593709-33604354 Glycine max
Glyma.11G242000 0.5kb downstream 0.5kb downstream 500 false Chr11: 33603855-33604354 Glycine max
Glyma.11G242000 1.0kb upstream 1.0kb upstream 11146 true Chr11: 33592709-33603854 Glycine max
Glyma.11G242000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 33592709-33593708 Glycine max
Glyma.11G242000 1.0kb downstream 1.0kb downstream 11146 true Chr11: 33593709-33604854 Glycine max
Glyma.11G242000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 33603855-33604854 Glycine max
Glyma.11G242000 2.0kb upstream 2.0kb upstream 12146 true Chr11: 33591709-33603854 Glycine max
Glyma.11G242000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 33591709-33593708 Glycine max
Glyma.11G242000 2.0kb downstream 2.0kb downstream 12146 true Chr11: 33593709-33605854 Glycine max
Glyma.11G242000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 33603855-33605854 Glycine max
Glyma.11G242000 5.0kb upstream 5.0kb upstream 15146 true Chr11: 33588709-33603854 Glycine max
Glyma.11G242000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 33588709-33593708 Glycine max
Glyma.11G242000 5.0kb downstream 5.0kb downstream 15146 true Chr11: 33593709-33608854 Glycine max
Glyma.11G242000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 33603855-33608854 Glycine max
Glyma.11G242000 10.0kb upstream 10.0kb upstream 20146 true Chr11: 33583709-33603854 Glycine max
Glyma.11G242000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 33583709-33593708 Glycine max
Glyma.11G242000 10.0kb downstream 10.0kb downstream 20146 true Chr11: 33593709-33613854 Glycine max
Glyma.11G242000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 33603855-33613854 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309958 5265 Fabidae View MSA
124066630 5270 Rosid View MSA
123751188 5271 Pentapetalae View MSA
122786187 5272 Eudicot View MSA
122043749 5273 Angiosperm View MSA
121346120 5274 Embryophyte View MSA
123425964 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.27521 0.0 23.1272    
cufflinks 4.08692 0.0 13.2798   Low
cufflinks 7.64972 0.0 32.5121   High
cufflinks 6.90153 0.0 25.1872    
cufflinks 5.17797 0.0 19.1941    
cufflinks 6.23779 0.0 19.0531    
cufflinks 6.45101 0.0 23.5445    
cufflinks 6.9594 0.0 24.8043    
cufflinks 5.38312 0.0 19.7786    
cufflinks 0.973        
cufflinks 0.879        
cufflinks 1.116        
cufflinks 0.929        
cufflinks 0.984        
cufflinks 1.076        
cufflinks 0.988        
cufflinks 0.534       Low
cufflinks 1.202       High
cufflinks 0.856        
cufflinks 0.908        
cufflinks 1.137       High
cufflinks 0.951        
cufflinks 0.694       Low
cufflinks 1.026        
cufflinks 0.908        
cufflinks 0.787        

0 Strain