Gene : Glyma.11G242200 G. max Wm82.a2.v1
Defline:  (1 of 58) KOG0483 - Transcription factor HEX, contains HOX and HALZ domains Genomic Order:  2422
Name:  ? Glyma.11G242200 Secondary Identifier:  ? PAC:30527759
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G242200 0.5kb upstream 0.5kb upstream 3284 true Chr11: 33629979-33633262 Glycine max
Glyma.11G242200 0.5kb upstream 0.5kb upstream 500 false Chr11: 33632763-33633262 Glycine max
Glyma.11G242200 0.5kb downstream 0.5kb downstream 3284 true Chr11: 33629479-33632762 Glycine max
Glyma.11G242200 0.5kb downstream 0.5kb downstream 500 false Chr11: 33629479-33629978 Glycine max
Glyma.11G242200 1.0kb upstream 1.0kb upstream 3784 true Chr11: 33629979-33633762 Glycine max
Glyma.11G242200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 33632763-33633762 Glycine max
Glyma.11G242200 1.0kb downstream 1.0kb downstream 3784 true Chr11: 33628979-33632762 Glycine max
Glyma.11G242200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 33628979-33629978 Glycine max
Glyma.11G242200 2.0kb upstream 2.0kb upstream 4784 true Chr11: 33629979-33634762 Glycine max
Glyma.11G242200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 33632763-33634762 Glycine max
Glyma.11G242200 2.0kb downstream 2.0kb downstream 4784 true Chr11: 33627979-33632762 Glycine max
Glyma.11G242200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 33627979-33629978 Glycine max
Glyma.11G242200 5.0kb upstream 5.0kb upstream 7784 true Chr11: 33629979-33637762 Glycine max
Glyma.11G242200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 33632763-33637762 Glycine max
Glyma.11G242200 5.0kb downstream 5.0kb downstream 7784 true Chr11: 33624979-33632762 Glycine max
Glyma.11G242200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 33624979-33629978 Glycine max
Glyma.11G242200 10.0kb upstream 10.0kb upstream 12784 true Chr11: 33629979-33642762 Glycine max
Glyma.11G242200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 33632763-33642762 Glycine max
Glyma.11G242200 10.0kb downstream 10.0kb downstream 12784 true Chr11: 33619979-33632762 Glycine max
Glyma.11G242200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 33619979-33629978 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309913 5265 Fabidae View MSA
124072423 5270 Rosid View MSA
123750844 5271 Pentapetalae View MSA
122791201 5272 Eudicot View MSA
122049195 5273 Angiosperm View MSA
121351579 5274 Embryophyte View MSA
123382235 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 158.534 0.0 1189.78 High High
cufflinks 31.4837 0.0 133.631 High  
cufflinks 36.9883 0.0 163.417 High  
cufflinks 32.3074 0.0 139.341 High  
cufflinks 38.3227 0.0 170.426 High  
cufflinks 186.476 0.0 1564.26 High High
cufflinks 6.19151 0.0 22.853   Low
cufflinks 123.282 0.0 804.399 High  
cufflinks 88.632 0.0 481.016 High  
cufflinks 6.963        
cufflinks 9.968     High  
cufflinks 16.44     High  
cufflinks 16.852     High  
cufflinks 6.64        
cufflinks 6.741     High  
cufflinks 17.847     High  
cufflinks 1.99       Low
cufflinks 23.172     High High
cufflinks 6.8        
cufflinks 20.252     High  
cufflinks 15.059     High  
cufflinks 24.258     High High
cufflinks 11.952     High  
cufflinks 14.362     High  
cufflinks 20.025     High  
cufflinks 6.603     High  

0 Strain