Gene : Glyma.11G247000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11661:SF1 - 39S RIBOSOMAL PROTEIN L11, MITOCHONDRIAL Genomic Order:  2470
Name:  ? Glyma.11G247000 Secondary Identifier:  ? PAC:30531314
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G247000 0.5kb upstream 0.5kb upstream 1533 true Chr11: 33994465-33995997 Glycine max
Glyma.11G247000 0.5kb upstream 0.5kb upstream 500 false Chr11: 33994465-33994964 Glycine max
Glyma.11G247000 0.5kb downstream 0.5kb downstream 1533 true Chr11: 33994965-33996497 Glycine max
Glyma.11G247000 0.5kb downstream 0.5kb downstream 500 false Chr11: 33995998-33996497 Glycine max
Glyma.11G247000 1.0kb upstream 1.0kb upstream 2033 true Chr11: 33993965-33995997 Glycine max
Glyma.11G247000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 33993965-33994964 Glycine max
Glyma.11G247000 1.0kb downstream 1.0kb downstream 2033 true Chr11: 33994965-33996997 Glycine max
Glyma.11G247000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 33995998-33996997 Glycine max
Glyma.11G247000 2.0kb upstream 2.0kb upstream 3033 true Chr11: 33992965-33995997 Glycine max
Glyma.11G247000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 33992965-33994964 Glycine max
Glyma.11G247000 2.0kb downstream 2.0kb downstream 3033 true Chr11: 33994965-33997997 Glycine max
Glyma.11G247000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 33995998-33997997 Glycine max
Glyma.11G247000 5.0kb upstream 5.0kb upstream 6033 true Chr11: 33989965-33995997 Glycine max
Glyma.11G247000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 33989965-33994964 Glycine max
Glyma.11G247000 5.0kb downstream 5.0kb downstream 6033 true Chr11: 33994965-34000997 Glycine max
Glyma.11G247000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 33995998-34000997 Glycine max
Glyma.11G247000 10.0kb upstream 10.0kb upstream 11033 true Chr11: 33984965-33995997 Glycine max
Glyma.11G247000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 33984965-33994964 Glycine max
Glyma.11G247000 10.0kb downstream 10.0kb downstream 11033 true Chr11: 33994965-34005997 Glycine max
Glyma.11G247000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 33995998-34005997 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027971 5273 Angiosperm View MSA
122300583 5265 Fabidae View MSA
124066311 5270 Rosid View MSA
123737098 5271 Pentapetalae View MSA
122792636 5272 Eudicot View MSA
121346604 5274 Embryophyte View MSA
123425186 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.28917 0.0 24.4914    
cufflinks 9.19349 0.0 26.9359    
cufflinks 2.84646 0.0 9.80366   Low
cufflinks 4.34621 0.0 14.1196   Low
cufflinks 8.50528 0.0 24.8429    
cufflinks 5.60682 0.0 17.4373    
cufflinks 11.2053 0.0 31.894   High
cufflinks 6.86678 0.0 20.9091    
cufflinks 7.2973 0.0 21.906    
cufflinks 3.866        
cufflinks 3.916        
cufflinks 2.8        
cufflinks 3.083        
cufflinks 3.967        
cufflinks 2.61       Low
cufflinks 3.575        
cufflinks 9.432     High High
cufflinks 2.583       Low
cufflinks 5.545        
cufflinks 3.524        
cufflinks 4.149        
cufflinks 3.565        
cufflinks 3.529        
cufflinks 4.634        
cufflinks 3.228        
cufflinks 8.087     High High

0 Strain