Gene : Glyma.11G235500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR18901:SF29 - HALOACID DEHALOGENASE-LIKE HYDROLASE Genomic Order:  2355
Name:  ? Glyma.11G235500 Secondary Identifier:  ? PAC:30528629
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G235500 0.5kb upstream 0.5kb upstream 6293 true Chr11: 33042717-33049009 Glycine max
Glyma.11G235500 0.5kb upstream 0.5kb upstream 500 false Chr11: 33048510-33049009 Glycine max
Glyma.11G235500 0.5kb downstream 0.5kb downstream 6293 true Chr11: 33042217-33048509 Glycine max
Glyma.11G235500 0.5kb downstream 0.5kb downstream 500 false Chr11: 33042217-33042716 Glycine max
Glyma.11G235500 1.0kb upstream 1.0kb upstream 6793 true Chr11: 33042717-33049509 Glycine max
Glyma.11G235500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 33048510-33049509 Glycine max
Glyma.11G235500 1.0kb downstream 1.0kb downstream 6793 true Chr11: 33041717-33048509 Glycine max
Glyma.11G235500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 33041717-33042716 Glycine max
Glyma.11G235500 2.0kb upstream 2.0kb upstream 7793 true Chr11: 33042717-33050509 Glycine max
Glyma.11G235500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 33048510-33050509 Glycine max
Glyma.11G235500 2.0kb downstream 2.0kb downstream 7793 true Chr11: 33040717-33048509 Glycine max
Glyma.11G235500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 33040717-33042716 Glycine max
Glyma.11G235500 5.0kb upstream 5.0kb upstream 10793 true Chr11: 33042717-33053509 Glycine max
Glyma.11G235500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 33048510-33053509 Glycine max
Glyma.11G235500 5.0kb downstream 5.0kb downstream 10793 true Chr11: 33037717-33048509 Glycine max
Glyma.11G235500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 33037717-33042716 Glycine max
Glyma.11G235500 10.0kb upstream 10.0kb upstream 15793 true Chr11: 33042717-33058509 Glycine max
Glyma.11G235500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 33048510-33058509 Glycine max
Glyma.11G235500 10.0kb downstream 10.0kb downstream 15793 true Chr11: 33032717-33048509 Glycine max
Glyma.11G235500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 33032717-33042716 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300173 5265 Fabidae View MSA
124063319 5270 Rosid View MSA
123739364 5271 Pentapetalae View MSA
122791357 5272 Eudicot View MSA
122044656 5273 Angiosperm View MSA
121344215 5274 Embryophyte View MSA
123426092 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.1286 0.0 61.7198 High High
cufflinks 5.19854 0.0 15.6079    
cufflinks 31.2713 0.0 83.7455 High High
cufflinks 7.30598 0.0 20.9699    
cufflinks 4.75554 0.0 14.482    
cufflinks 7.03199 0.0 20.2813    
cufflinks 7.31756 0.0 21.045    
cufflinks 7.28078 0.0 20.9216    
cufflinks 5.98014 0.0 17.6099    
cufflinks 1.053       Low
cufflinks 2.829        
cufflinks 3.727       High
cufflinks 0.948       Low
cufflinks 0.845       Low
cufflinks 2.639        
cufflinks 2.63        
cufflinks 0.686       Low
cufflinks 1.637        
cufflinks 1.505        
cufflinks 3.68       High
cufflinks 1.75        
cufflinks 3.348        
cufflinks 2.099        
cufflinks 3.221        
cufflinks 3.419       High
cufflinks 1.385        

0 Strain