Gene : Glyma.12G019100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23248 - PHOSPHOLIPID SCRAMBLASE-RELATED Genomic Order:  191
Name:  ? Glyma.12G019100 Secondary Identifier:  ? PAC:30546805
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G019100 0.5kb upstream 0.5kb upstream 5147 true Chr12: 1341989-1347135 Glycine max
Glyma.12G019100 0.5kb upstream 0.5kb upstream 500 false Chr12: 1341989-1342488 Glycine max
Glyma.12G019100 0.5kb downstream 0.5kb downstream 5147 true Chr12: 1342489-1347635 Glycine max
Glyma.12G019100 0.5kb downstream 0.5kb downstream 500 false Chr12: 1347136-1347635 Glycine max
Glyma.12G019100 1.0kb upstream 1.0kb upstream 5647 true Chr12: 1341489-1347135 Glycine max
Glyma.12G019100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 1341489-1342488 Glycine max
Glyma.12G019100 1.0kb downstream 1.0kb downstream 5647 true Chr12: 1342489-1348135 Glycine max
Glyma.12G019100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 1347136-1348135 Glycine max
Glyma.12G019100 2.0kb upstream 2.0kb upstream 6647 true Chr12: 1340489-1347135 Glycine max
Glyma.12G019100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 1340489-1342488 Glycine max
Glyma.12G019100 2.0kb downstream 2.0kb downstream 6647 true Chr12: 1342489-1349135 Glycine max
Glyma.12G019100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 1347136-1349135 Glycine max
Glyma.12G019100 5.0kb upstream 5.0kb upstream 9647 true Chr12: 1337489-1347135 Glycine max
Glyma.12G019100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 1337489-1342488 Glycine max
Glyma.12G019100 5.0kb downstream 5.0kb downstream 9647 true Chr12: 1342489-1352135 Glycine max
Glyma.12G019100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 1347136-1352135 Glycine max
Glyma.12G019100 10.0kb upstream 10.0kb upstream 14647 true Chr12: 1332489-1347135 Glycine max
Glyma.12G019100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 1332489-1342488 Glycine max
Glyma.12G019100 10.0kb downstream 10.0kb downstream 14647 true Chr12: 1342489-1357135 Glycine max
Glyma.12G019100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 1347136-1357135 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304933 5265 Fabidae View MSA
124061605 5270 Rosid View MSA
123745510 5271 Pentapetalae View MSA
122771532 5272 Eudicot View MSA
122047662 5273 Angiosperm View MSA
121346746 5274 Embryophyte View MSA
123427032 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.21839 0.0 33.3703    
cufflinks 9.4193 0.0 33.9959    
cufflinks 10.9249 0.0 38.4615    
cufflinks 9.4962 0.0 34.3846    
cufflinks 11.0255 0.0 38.8202    
cufflinks 15.3323 0.0 52.3464   High
cufflinks 8.04389 0.0 29.9735   Low
cufflinks 11.3146 0.0 39.7238    
cufflinks 10.8647 0.0 38.34    
cufflinks 1.482        
cufflinks 0.874       Low
cufflinks 1.659        
cufflinks 2.175       High
cufflinks 2.227       High
cufflinks 0.981       Low
cufflinks 1.357        
cufflinks 1.517        
cufflinks 1.845        
cufflinks 2.023       High
cufflinks 1.452        
cufflinks 1.011       Low
cufflinks 1.65        
cufflinks 1.572        
cufflinks 1.374        
cufflinks 1.404        
cufflinks 1.408        

0 Strain