Gene : Glyma.12G021600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11134//PTHR11134:SF14 - ADAPTER-RELATED PROTEIN COMPLEX, BETA SUBUNIT Genomic Order:  216
Name:  ? Glyma.12G021600 Secondary Identifier:  ? PAC:30548488
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G021600 0.5kb upstream 0.5kb upstream 7635 true Chr12: 1554269-1561903 Glycine max
Glyma.12G021600 0.5kb upstream 0.5kb upstream 500 false Chr12: 1561404-1561903 Glycine max
Glyma.12G021600 0.5kb downstream 0.5kb downstream 7635 true Chr12: 1553769-1561403 Glycine max
Glyma.12G021600 0.5kb downstream 0.5kb downstream 500 false Chr12: 1553769-1554268 Glycine max
Glyma.12G021600 1.0kb upstream 1.0kb upstream 8135 true Chr12: 1554269-1562403 Glycine max
Glyma.12G021600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 1561404-1562403 Glycine max
Glyma.12G021600 1.0kb downstream 1.0kb downstream 8135 true Chr12: 1553269-1561403 Glycine max
Glyma.12G021600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 1553269-1554268 Glycine max
Glyma.12G021600 2.0kb upstream 2.0kb upstream 9135 true Chr12: 1554269-1563403 Glycine max
Glyma.12G021600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 1561404-1563403 Glycine max
Glyma.12G021600 2.0kb downstream 2.0kb downstream 9135 true Chr12: 1552269-1561403 Glycine max
Glyma.12G021600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 1552269-1554268 Glycine max
Glyma.12G021600 5.0kb upstream 5.0kb upstream 12135 true Chr12: 1554269-1566403 Glycine max
Glyma.12G021600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 1561404-1566403 Glycine max
Glyma.12G021600 5.0kb downstream 5.0kb downstream 12135 true Chr12: 1549269-1561403 Glycine max
Glyma.12G021600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 1549269-1554268 Glycine max
Glyma.12G021600 10.0kb upstream 10.0kb upstream 17135 true Chr12: 1554269-1571403 Glycine max
Glyma.12G021600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 1561404-1571403 Glycine max
Glyma.12G021600 10.0kb downstream 10.0kb downstream 17135 true Chr12: 1544269-1561403 Glycine max
Glyma.12G021600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 1544269-1554268 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311305 5265 Fabidae View MSA
124062772 5270 Rosid View MSA
123744505 5271 Pentapetalae View MSA
122790375 5272 Eudicot View MSA
122047828 5273 Angiosperm View MSA
121343872 5274 Embryophyte View MSA
123426129 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.90297 0.0 20.9733   Low
cufflinks 12.3963 0.0 37.0915    
cufflinks 6.99799 0.0 21.1852   Low
cufflinks 13.0563 0.0 39.2456    
cufflinks 16.45 0.0 58.5331   High
cufflinks 11.1989 0.0 33.1947    
cufflinks 12.0666 0.0 36.0202    
cufflinks 14.6063 0.0 44.1278    
cufflinks 10.3012 0.0 30.6322    
cufflinks 4.869       High
cufflinks 1.207       Low
cufflinks 2.071        
cufflinks 4.642       High
cufflinks 5.753       High
cufflinks 1.662        
cufflinks 2.842        
cufflinks 2.075        
cufflinks 3.733        
cufflinks 3.701        
cufflinks 2.206        
cufflinks 1.772        
cufflinks 2.22        
cufflinks 2.408        
cufflinks 1.032       Low
cufflinks 2.255        
cufflinks 1.889        

0 Strain