Gene : Glyma.12G022500 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG0018//KOG0933//KOG0964//KOG4643 - Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) // Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) // Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) // Uncharacterized coiled-coil protein Genomic Order:  225
Name:  ? Glyma.12G022500 Secondary Identifier:  ? PAC:30548854
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G022500 0.5kb upstream 0.5kb upstream 10775 true Chr12: 1638855-1649629 Glycine max
Glyma.12G022500 0.5kb upstream 0.5kb upstream 500 false Chr12: 1638855-1639354 Glycine max
Glyma.12G022500 0.5kb downstream 0.5kb downstream 10775 true Chr12: 1639355-1650129 Glycine max
Glyma.12G022500 0.5kb downstream 0.5kb downstream 500 false Chr12: 1649630-1650129 Glycine max
Glyma.12G022500 1.0kb upstream 1.0kb upstream 11275 true Chr12: 1638355-1649629 Glycine max
Glyma.12G022500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 1638355-1639354 Glycine max
Glyma.12G022500 1.0kb downstream 1.0kb downstream 11275 true Chr12: 1639355-1650629 Glycine max
Glyma.12G022500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 1649630-1650629 Glycine max
Glyma.12G022500 2.0kb upstream 2.0kb upstream 12275 true Chr12: 1637355-1649629 Glycine max
Glyma.12G022500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 1637355-1639354 Glycine max
Glyma.12G022500 2.0kb downstream 2.0kb downstream 12275 true Chr12: 1639355-1651629 Glycine max
Glyma.12G022500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 1649630-1651629 Glycine max
Glyma.12G022500 5.0kb upstream 5.0kb upstream 15275 true Chr12: 1634355-1649629 Glycine max
Glyma.12G022500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 1634355-1639354 Glycine max
Glyma.12G022500 5.0kb downstream 5.0kb downstream 15275 true Chr12: 1639355-1654629 Glycine max
Glyma.12G022500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 1649630-1654629 Glycine max
Glyma.12G022500 10.0kb upstream 10.0kb upstream 20275 true Chr12: 1629355-1649629 Glycine max
Glyma.12G022500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 1629355-1639354 Glycine max
Glyma.12G022500 10.0kb downstream 10.0kb downstream 20275 true Chr12: 1639355-1659629 Glycine max
Glyma.12G022500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 1649630-1659629 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307309 5265 Fabidae View MSA
124066558 5270 Rosid View MSA
123748298 5271 Pentapetalae View MSA
122786637 5272 Eudicot View MSA
122049779 5273 Angiosperm View MSA
121351769 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.3142 0.0 48.1313    
cufflinks 3.57307 0.0 14.001   Low
cufflinks 11.0618 0.0 47.6593    
cufflinks 9.9456 0.0 37.9669    
cufflinks 8.68369 0.0 35.5422    
cufflinks 15.1231 0.0 70.01    
cufflinks 1.82445 0.0 6.04601   Low
cufflinks 17.7587 0.0 79.0789   High
cufflinks 9.55549 0.0 39.5504    
cufflinks 3.277        
cufflinks 4.558       High
cufflinks 2.638        
cufflinks 4.183        
cufflinks 2.549        
cufflinks 1.76        
cufflinks 0.838       Low
cufflinks 1.845        
cufflinks 2.031        
cufflinks 1.043        
cufflinks 0.818       Low
cufflinks 5.461       High
cufflinks 1.503        
cufflinks 0.565       Low
cufflinks 6.621     High High
cufflinks 0.943       Low
cufflinks 5.486       High

0 Strain