Gene : Glyma.12G024100 G. max Wm82.a2.v1
Genomic Order:  241 Name:  ? Glyma.12G024100
Secondary Identifier:  ? PAC:30545393
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G024100 0.5kb upstream 0.5kb upstream 2866 true Chr12: 1759502-1762367 Glycine max
Glyma.12G024100 0.5kb upstream 0.5kb upstream 500 false Chr12: 1759502-1760001 Glycine max
Glyma.12G024100 0.5kb downstream 0.5kb downstream 2866 true Chr12: 1760002-1762867 Glycine max
Glyma.12G024100 0.5kb downstream 0.5kb downstream 500 false Chr12: 1762368-1762867 Glycine max
Glyma.12G024100 1.0kb upstream 1.0kb upstream 3366 true Chr12: 1759002-1762367 Glycine max
Glyma.12G024100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 1759002-1760001 Glycine max
Glyma.12G024100 1.0kb downstream 1.0kb downstream 3366 true Chr12: 1760002-1763367 Glycine max
Glyma.12G024100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 1762368-1763367 Glycine max
Glyma.12G024100 2.0kb upstream 2.0kb upstream 4366 true Chr12: 1758002-1762367 Glycine max
Glyma.12G024100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 1758002-1760001 Glycine max
Glyma.12G024100 2.0kb downstream 2.0kb downstream 4366 true Chr12: 1760002-1764367 Glycine max
Glyma.12G024100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 1762368-1764367 Glycine max
Glyma.12G024100 5.0kb upstream 5.0kb upstream 7366 true Chr12: 1755002-1762367 Glycine max
Glyma.12G024100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 1755002-1760001 Glycine max
Glyma.12G024100 5.0kb downstream 5.0kb downstream 7366 true Chr12: 1760002-1767367 Glycine max
Glyma.12G024100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 1762368-1767367 Glycine max
Glyma.12G024100 10.0kb upstream 10.0kb upstream 12366 true Chr12: 1750002-1762367 Glycine max
Glyma.12G024100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 1750002-1760001 Glycine max
Glyma.12G024100 10.0kb downstream 10.0kb downstream 12366 true Chr12: 1760002-1772367 Glycine max
Glyma.12G024100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 1762368-1772367 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656414 5273 Angiosperm View MSA
122298401 5265 Fabidae View MSA
124036444 5270 Rosid View MSA
123609790 5271 Pentapetalae View MSA
122644431 5272 Eudicot View MSA
120928490 5274 Embryophyte View MSA
122969093 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.33482 0.0 13.6426    
cufflinks 0.930266 0.0 4.35895   Low
cufflinks 7.34198 0.0 34.7772    
cufflinks 16.0257 0.0 67.7002   High
cufflinks 3.24771 0.0 21.0232    
cufflinks 4.41705 0.0 14.7991    
cufflinks 2.6504 0.0 13.8346    
cufflinks 5.59087 0.0 33.3086    
cufflinks 5.09789 0.0 27.4258    
cufflinks 1.488       High
cufflinks 0.052     Low Low
cufflinks 1.605       High
cufflinks 1.754       High
cufflinks 0.293        
cufflinks 0.013     Low Low
cufflinks 0.859        
cufflinks 0.193        
cufflinks 0.619        
cufflinks 0.377        
cufflinks 0.868        
cufflinks 0.076        
cufflinks 0.908        
cufflinks 0.508        
cufflinks 0.013     Low Low
cufflinks 1.077        
cufflinks 0.127        

0 Strain