Gene : Glyma.12G018000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12548 - TRANSCRIPTION FACTOR DP Genomic Order:  180
Name:  ? Glyma.12G018000 Secondary Identifier:  ? PAC:30549112
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G018000 0.5kb upstream 0.5kb upstream 4122 true Chr12: 1252709-1256830 Glycine max
Glyma.12G018000 0.5kb upstream 0.5kb upstream 500 false Chr12: 1256331-1256830 Glycine max
Glyma.12G018000 0.5kb downstream 0.5kb downstream 4122 true Chr12: 1252209-1256330 Glycine max
Glyma.12G018000 0.5kb downstream 0.5kb downstream 500 false Chr12: 1252209-1252708 Glycine max
Glyma.12G018000 1.0kb upstream 1.0kb upstream 4622 true Chr12: 1252709-1257330 Glycine max
Glyma.12G018000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 1256331-1257330 Glycine max
Glyma.12G018000 1.0kb downstream 1.0kb downstream 4622 true Chr12: 1251709-1256330 Glycine max
Glyma.12G018000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 1251709-1252708 Glycine max
Glyma.12G018000 2.0kb upstream 2.0kb upstream 5622 true Chr12: 1252709-1258330 Glycine max
Glyma.12G018000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 1256331-1258330 Glycine max
Glyma.12G018000 2.0kb downstream 2.0kb downstream 5622 true Chr12: 1250709-1256330 Glycine max
Glyma.12G018000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 1250709-1252708 Glycine max
Glyma.12G018000 5.0kb upstream 5.0kb upstream 8622 true Chr12: 1252709-1261330 Glycine max
Glyma.12G018000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 1256331-1261330 Glycine max
Glyma.12G018000 5.0kb downstream 5.0kb downstream 8622 true Chr12: 1247709-1256330 Glycine max
Glyma.12G018000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 1247709-1252708 Glycine max
Glyma.12G018000 10.0kb upstream 10.0kb upstream 13622 true Chr12: 1252709-1266330 Glycine max
Glyma.12G018000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 1256331-1266330 Glycine max
Glyma.12G018000 10.0kb downstream 10.0kb downstream 13622 true Chr12: 1242709-1256330 Glycine max
Glyma.12G018000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 1242709-1252708 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255176 5265 Fabidae View MSA
123997008 5270 Rosid View MSA
123571374 5271 Pentapetalae View MSA
122606100 5272 Eudicot View MSA
122050879 5273 Angiosperm View MSA
121349411 5274 Embryophyte View MSA
123427533 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.60028 0.0 36.1266    
cufflinks 10.5865 0.0 42.6984    
cufflinks 8.77554 0.0 39.6917    
cufflinks 6.02843 0.0 24.7752    
cufflinks 7.79614 0.0 36.4574    
cufflinks 6.50283 0.0 25.9397    
cufflinks 10.9315 0.0 47.8092    
cufflinks 23.7395 0.0 98.4861 High High
cufflinks 5.69609 0.0 26.9098   Low
cufflinks 1.636       High
cufflinks 0.683        
cufflinks 0.715        
cufflinks 0.838        
cufflinks 0.921        
cufflinks 0.586       Low
cufflinks 1.079        
cufflinks 0.551       Low
cufflinks 0.801        
cufflinks 1.289       High
cufflinks 0.977        
cufflinks 1.027        
cufflinks 1.12        
cufflinks 1.23        
cufflinks 1.068        
cufflinks 0.93        
cufflinks 0.448       Low

0 Strain