Gene : Glyma.12G012300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR19139:SF54 - AQUAPORIN TIP5-1-RELATED Genomic Order:  123
Name:  ? Glyma.12G012300 Secondary Identifier:  ? PAC:30546950
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G012300 0.5kb upstream 0.5kb upstream 1464 true Chr12: 900156-901619 Glycine max
Glyma.12G012300 0.5kb upstream 0.5kb upstream 500 false Chr12: 901120-901619 Glycine max
Glyma.12G012300 0.5kb downstream 0.5kb downstream 1464 true Chr12: 899656-901119 Glycine max
Glyma.12G012300 0.5kb downstream 0.5kb downstream 500 false Chr12: 899656-900155 Glycine max
Glyma.12G012300 1.0kb upstream 1.0kb upstream 1964 true Chr12: 900156-902119 Glycine max
Glyma.12G012300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 901120-902119 Glycine max
Glyma.12G012300 1.0kb downstream 1.0kb downstream 1964 true Chr12: 899156-901119 Glycine max
Glyma.12G012300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 899156-900155 Glycine max
Glyma.12G012300 2.0kb upstream 2.0kb upstream 2964 true Chr12: 900156-903119 Glycine max
Glyma.12G012300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 901120-903119 Glycine max
Glyma.12G012300 2.0kb downstream 2.0kb downstream 2964 true Chr12: 898156-901119 Glycine max
Glyma.12G012300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 898156-900155 Glycine max
Glyma.12G012300 5.0kb upstream 5.0kb upstream 5964 true Chr12: 900156-906119 Glycine max
Glyma.12G012300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 901120-906119 Glycine max
Glyma.12G012300 5.0kb downstream 5.0kb downstream 5964 true Chr12: 895156-901119 Glycine max
Glyma.12G012300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 895156-900155 Glycine max
Glyma.12G012300 10.0kb upstream 10.0kb upstream 10964 true Chr12: 900156-911119 Glycine max
Glyma.12G012300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 901120-911119 Glycine max
Glyma.12G012300 10.0kb downstream 10.0kb downstream 10964 true Chr12: 890156-901119 Glycine max
Glyma.12G012300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 890156-900155 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122240004 5265 Fabidae Singleton cluster - no MSA
124072233 5270 Rosid View MSA
123751713 5271 Pentapetalae View MSA
122774146 5272 Eudicot View MSA
122041600 5273 Angiosperm View MSA
121309868 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.069     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.329       High
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.051     Low  
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  

0 Strain