Gene : Glyma.12G003700 G. max Wm82.a2.v1
Defline:  (1 of 104) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  37
Name:  ? Glyma.12G003700 Secondary Identifier:  ? PAC:30545898
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G003700 0.5kb upstream 0.5kb upstream 2421 true Chr12: 294251-296671 Glycine max
Glyma.12G003700 0.5kb upstream 0.5kb upstream 500 false Chr12: 294251-294750 Glycine max
Glyma.12G003700 0.5kb downstream 0.5kb downstream 2421 true Chr12: 294751-297171 Glycine max
Glyma.12G003700 0.5kb downstream 0.5kb downstream 500 false Chr12: 296672-297171 Glycine max
Glyma.12G003700 1.0kb upstream 1.0kb upstream 2921 true Chr12: 293751-296671 Glycine max
Glyma.12G003700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 293751-294750 Glycine max
Glyma.12G003700 1.0kb downstream 1.0kb downstream 2921 true Chr12: 294751-297671 Glycine max
Glyma.12G003700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 296672-297671 Glycine max
Glyma.12G003700 2.0kb upstream 2.0kb upstream 3921 true Chr12: 292751-296671 Glycine max
Glyma.12G003700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 292751-294750 Glycine max
Glyma.12G003700 2.0kb downstream 2.0kb downstream 3921 true Chr12: 294751-298671 Glycine max
Glyma.12G003700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 296672-298671 Glycine max
Glyma.12G003700 5.0kb upstream 5.0kb upstream 6921 true Chr12: 289751-296671 Glycine max
Glyma.12G003700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 289751-294750 Glycine max
Glyma.12G003700 5.0kb downstream 5.0kb downstream 6921 true Chr12: 294751-301671 Glycine max
Glyma.12G003700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 296672-301671 Glycine max
Glyma.12G003700 10.0kb upstream 10.0kb upstream 11921 true Chr12: 284751-296671 Glycine max
Glyma.12G003700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 284751-294750 Glycine max
Glyma.12G003700 10.0kb downstream 10.0kb downstream 11921 true Chr12: 294751-306671 Glycine max
Glyma.12G003700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 296672-306671 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314178 5265 Fabidae View MSA
124070803 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0232033 0.0 0.103986 Low Low
cufflinks 0.0368069 0.0 0.158676 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0378687 0.0 0.163097 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain