Gene : Glyma.12G050900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10366:SF386 - 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 3 Genomic Order:  509
Name:  ? Glyma.12G050900 Secondary Identifier:  ? PAC:30546570
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G050900 0.5kb upstream 0.5kb upstream 7637 true Chr12: 3655978-3663614 Glycine max
Glyma.12G050900 0.5kb upstream 0.5kb upstream 500 false Chr12: 3655978-3656477 Glycine max
Glyma.12G050900 0.5kb downstream 0.5kb downstream 7637 true Chr12: 3656478-3664114 Glycine max
Glyma.12G050900 0.5kb downstream 0.5kb downstream 500 false Chr12: 3663615-3664114 Glycine max
Glyma.12G050900 1.0kb upstream 1.0kb upstream 8137 true Chr12: 3655478-3663614 Glycine max
Glyma.12G050900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3655478-3656477 Glycine max
Glyma.12G050900 1.0kb downstream 1.0kb downstream 8137 true Chr12: 3656478-3664614 Glycine max
Glyma.12G050900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3663615-3664614 Glycine max
Glyma.12G050900 2.0kb upstream 2.0kb upstream 9137 true Chr12: 3654478-3663614 Glycine max
Glyma.12G050900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3654478-3656477 Glycine max
Glyma.12G050900 2.0kb downstream 2.0kb downstream 9137 true Chr12: 3656478-3665614 Glycine max
Glyma.12G050900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3663615-3665614 Glycine max
Glyma.12G050900 5.0kb upstream 5.0kb upstream 12137 true Chr12: 3651478-3663614 Glycine max
Glyma.12G050900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3651478-3656477 Glycine max
Glyma.12G050900 5.0kb downstream 5.0kb downstream 12137 true Chr12: 3656478-3668614 Glycine max
Glyma.12G050900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3663615-3668614 Glycine max
Glyma.12G050900 10.0kb upstream 10.0kb upstream 17137 true Chr12: 3646478-3663614 Glycine max
Glyma.12G050900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3646478-3656477 Glycine max
Glyma.12G050900 10.0kb downstream 10.0kb downstream 17137 true Chr12: 3656478-3673614 Glycine max
Glyma.12G050900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3663615-3673614 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303810 5265 Fabidae View MSA
124067193 5270 Rosid View MSA
123744722 5271 Pentapetalae View MSA
122787182 5272 Eudicot View MSA
122048843 5273 Angiosperm View MSA
121311135 5274 Embryophyte View MSA
123427810 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.701773 0.0 4.83196   Low
cufflinks 2.57131 0.0 11.2905    
cufflinks 0.70384 0.0 4.03801   Low
cufflinks 4.46481 0.0 21.0106    
cufflinks 3.36797 0.0 15.8753    
cufflinks 1.42258 0.0 8.66061    
cufflinks 6.98446 0.0 29.5225   High
cufflinks 4.92915 0.0 23.0441    
cufflinks 1.70338 0.0 9.85158    
cufflinks 0.526       High
cufflinks 0.037     Low Low
cufflinks 0.138        
cufflinks 0.289        
cufflinks 0.285        
cufflinks 0.027     Low Low
cufflinks 0.183        
cufflinks 0.144        
cufflinks 0.206        
cufflinks 0.204        
cufflinks 0.2        
cufflinks 0.068        
cufflinks 0.189        
cufflinks 0.204        
cufflinks 0.035     Low Low
cufflinks 0.167        
cufflinks 0.078        

0 Strain