Gene : Glyma.12G043100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13068:SF4 - TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN Genomic Order:  431
Name:  ? Glyma.12G043100 Secondary Identifier:  ? PAC:30546996
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G043100 0.5kb upstream 0.5kb upstream 4698 true Chr12: 3127778-3132475 Glycine max
Glyma.12G043100 0.5kb upstream 0.5kb upstream 500 false Chr12: 3127778-3128277 Glycine max
Glyma.12G043100 0.5kb downstream 0.5kb downstream 4698 true Chr12: 3128278-3132975 Glycine max
Glyma.12G043100 0.5kb downstream 0.5kb downstream 500 false Chr12: 3132476-3132975 Glycine max
Glyma.12G043100 1.0kb upstream 1.0kb upstream 5198 true Chr12: 3127278-3132475 Glycine max
Glyma.12G043100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3127278-3128277 Glycine max
Glyma.12G043100 1.0kb downstream 1.0kb downstream 5198 true Chr12: 3128278-3133475 Glycine max
Glyma.12G043100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3132476-3133475 Glycine max
Glyma.12G043100 2.0kb upstream 2.0kb upstream 6198 true Chr12: 3126278-3132475 Glycine max
Glyma.12G043100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3126278-3128277 Glycine max
Glyma.12G043100 2.0kb downstream 2.0kb downstream 6198 true Chr12: 3128278-3134475 Glycine max
Glyma.12G043100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3132476-3134475 Glycine max
Glyma.12G043100 5.0kb upstream 5.0kb upstream 9198 true Chr12: 3123278-3132475 Glycine max
Glyma.12G043100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3123278-3128277 Glycine max
Glyma.12G043100 5.0kb downstream 5.0kb downstream 9198 true Chr12: 3128278-3137475 Glycine max
Glyma.12G043100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3132476-3137475 Glycine max
Glyma.12G043100 10.0kb upstream 10.0kb upstream 14198 true Chr12: 3118278-3132475 Glycine max
Glyma.12G043100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3118278-3128277 Glycine max
Glyma.12G043100 10.0kb downstream 10.0kb downstream 14198 true Chr12: 3128278-3142475 Glycine max
Glyma.12G043100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3132476-3142475 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301320 5265 Fabidae View MSA
124068588 5270 Rosid View MSA
123748768 5271 Pentapetalae View MSA
122785752 5272 Eudicot View MSA
122044224 5273 Angiosperm View MSA
121347901 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.17998 0.0 30.8161   High
cufflinks 5.5684 0.0 24.6277    
cufflinks 6.13851 0.0 24.5417    
cufflinks 3.82654 0.0 17.4979    
cufflinks 1.60034 0.0 9.81609    
cufflinks 0.586328 0.0 2.53605   Low
cufflinks 5.39897 0.0 22.2915    
cufflinks 2.58348 0.0 13.3443    
cufflinks 2.39339 0.0 12.684    
cufflinks 0.515        
cufflinks 0.254        
cufflinks 1.731        
cufflinks 0.211        
cufflinks 0.213        
cufflinks 0.686        
cufflinks 2.044        
cufflinks 0.17       Low
cufflinks 1.865        
cufflinks 1.126        
cufflinks 3.962       High
cufflinks 0.174       Low
cufflinks 3.097       High
cufflinks 2.207        
cufflinks 0.215        
cufflinks 2.821       High
cufflinks 0.143       Low

0 Strain