Gene : Glyma.12G030100 G. max Wm82.a2.v1
Defline:  (1 of 18) KOG2922 - Uncharacterized conserved protein Genomic Order:  301
Name:  ? Glyma.12G030100 Secondary Identifier:  ? PAC:30548250
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G030100 0.5kb upstream 0.5kb upstream 3937 true Chr12: 2250075-2254011 Glycine max
Glyma.12G030100 0.5kb upstream 0.5kb upstream 500 false Chr12: 2250075-2250574 Glycine max
Glyma.12G030100 0.5kb downstream 0.5kb downstream 3937 true Chr12: 2250575-2254511 Glycine max
Glyma.12G030100 0.5kb downstream 0.5kb downstream 500 false Chr12: 2254012-2254511 Glycine max
Glyma.12G030100 1.0kb upstream 1.0kb upstream 4437 true Chr12: 2249575-2254011 Glycine max
Glyma.12G030100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 2249575-2250574 Glycine max
Glyma.12G030100 1.0kb downstream 1.0kb downstream 4437 true Chr12: 2250575-2255011 Glycine max
Glyma.12G030100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 2254012-2255011 Glycine max
Glyma.12G030100 2.0kb upstream 2.0kb upstream 5437 true Chr12: 2248575-2254011 Glycine max
Glyma.12G030100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 2248575-2250574 Glycine max
Glyma.12G030100 2.0kb downstream 2.0kb downstream 5437 true Chr12: 2250575-2256011 Glycine max
Glyma.12G030100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 2254012-2256011 Glycine max
Glyma.12G030100 5.0kb upstream 5.0kb upstream 8437 true Chr12: 2245575-2254011 Glycine max
Glyma.12G030100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 2245575-2250574 Glycine max
Glyma.12G030100 5.0kb downstream 5.0kb downstream 8437 true Chr12: 2250575-2259011 Glycine max
Glyma.12G030100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 2254012-2259011 Glycine max
Glyma.12G030100 10.0kb upstream 10.0kb upstream 13437 true Chr12: 2240575-2254011 Glycine max
Glyma.12G030100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 2240575-2250574 Glycine max
Glyma.12G030100 10.0kb downstream 10.0kb downstream 13437 true Chr12: 2250575-2264011 Glycine max
Glyma.12G030100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 2254012-2264011 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310779 5265 Fabidae View MSA
124060815 5270 Rosid View MSA
123740970 5271 Pentapetalae View MSA
122795464 5272 Eudicot View MSA
122048593 5273 Angiosperm View MSA
121350958 5274 Embryophyte View MSA
123428746 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.0338 0.0 72.5831   High
cufflinks 6.75724 0.0 26.7623    
cufflinks 18.0702 0.0 62.3046   High
cufflinks 7.98902 0.0 30.5138    
cufflinks 4.67138 0.0 17.9378   Low
cufflinks 8.6906 0.0 32.6514    
cufflinks 5.94951 0.0 24.878    
cufflinks 9.26739 0.0 34.5394    
cufflinks 4.41828 0.0 17.3241   Low
cufflinks 8.663     High  
cufflinks 11.541     High  
cufflinks 4.848        
cufflinks 1.395       Low
cufflinks 0.987       Low
cufflinks 11.739     High  
cufflinks 12.037     High  
cufflinks 5.799        
cufflinks 3.759        
cufflinks 2.83       Low
cufflinks 12.447     High  
cufflinks 7.002     High  
cufflinks 8.495     High  
cufflinks 7.334        
cufflinks 6.797     High  
cufflinks 14.663     High High
cufflinks 6.643     High  

0 Strain