Gene : Glyma.12G033100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22850:SF82 - HISTONE-BINDING PROTEIN RBBP7 Genomic Order:  331
Name:  ? Glyma.12G033100 Secondary Identifier:  ? PAC:30548613
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G033100 0.5kb upstream 0.5kb upstream 3331 true Chr12: 2498908-2502238 Glycine max
Glyma.12G033100 0.5kb upstream 0.5kb upstream 500 false Chr12: 2501739-2502238 Glycine max
Glyma.12G033100 0.5kb downstream 0.5kb downstream 3331 true Chr12: 2498408-2501738 Glycine max
Glyma.12G033100 0.5kb downstream 0.5kb downstream 500 false Chr12: 2498408-2498907 Glycine max
Glyma.12G033100 1.0kb upstream 1.0kb upstream 3831 true Chr12: 2498908-2502738 Glycine max
Glyma.12G033100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 2501739-2502738 Glycine max
Glyma.12G033100 1.0kb downstream 1.0kb downstream 3831 true Chr12: 2497908-2501738 Glycine max
Glyma.12G033100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 2497908-2498907 Glycine max
Glyma.12G033100 2.0kb upstream 2.0kb upstream 4831 true Chr12: 2498908-2503738 Glycine max
Glyma.12G033100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 2501739-2503738 Glycine max
Glyma.12G033100 2.0kb downstream 2.0kb downstream 4831 true Chr12: 2496908-2501738 Glycine max
Glyma.12G033100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 2496908-2498907 Glycine max
Glyma.12G033100 5.0kb upstream 5.0kb upstream 7831 true Chr12: 2498908-2506738 Glycine max
Glyma.12G033100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 2501739-2506738 Glycine max
Glyma.12G033100 5.0kb downstream 5.0kb downstream 7831 true Chr12: 2493908-2501738 Glycine max
Glyma.12G033100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 2493908-2498907 Glycine max
Glyma.12G033100 10.0kb upstream 10.0kb upstream 12831 true Chr12: 2498908-2511738 Glycine max
Glyma.12G033100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 2501739-2511738 Glycine max
Glyma.12G033100 10.0kb downstream 10.0kb downstream 12831 true Chr12: 2488908-2501738 Glycine max
Glyma.12G033100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 2488908-2498907 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026585 5273 Angiosperm View MSA
122306794 5265 Fabidae View MSA
124062099 5270 Rosid View MSA
123737896 5271 Pentapetalae View MSA
122786745 5272 Eudicot View MSA
121350438 5274 Embryophyte View MSA
123428491 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.11463 0.0 25.2638    
cufflinks 24.8682 0.0 66.3948 High High
cufflinks 5.75699 0.0 16.7876   Low
cufflinks 10.2638 0.0 28.1808    
cufflinks 17.6874 0.0 47.2895    
cufflinks 13.1047 0.0 35.4149    
cufflinks 9.58676 0.0 26.4459    
cufflinks 14.507 0.0 39.0187    
cufflinks 16.2373 0.0 43.5035    
cufflinks 4.739        
cufflinks 1.252       Low
cufflinks 6.953        
cufflinks 13.236     High High
cufflinks 18.051     High High
cufflinks 1.983       Low
cufflinks 6.161        
cufflinks 2.957        
cufflinks 5.561        
cufflinks 16.397     High High
cufflinks 4.738        
cufflinks 1.358       Low
cufflinks 5.649        
cufflinks 11.876     High High
cufflinks 1.776       Low
cufflinks 6.038        
cufflinks 2.273        

0 Strain