Gene : Glyma.12G036200 G. max Wm82.a2.v1
Defline:  (1 of 5) 2.4.2.14 - Amidophosphoribosyltransferase / Phosphoribosyldiphosphate 5-amidotransferase Genomic Order:  362
Name:  ? Glyma.12G036200 Secondary Identifier:  ? PAC:30548259
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6121 Glycine max pathologic  
Gmax PWY-841 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G036200 0.5kb upstream 0.5kb upstream 2806 true Chr12: 2641839-2644644 Glycine max
Glyma.12G036200 0.5kb upstream 0.5kb upstream 500 false Chr12: 2641839-2642338 Glycine max
Glyma.12G036200 0.5kb downstream 0.5kb downstream 2806 true Chr12: 2642339-2645144 Glycine max
Glyma.12G036200 0.5kb downstream 0.5kb downstream 500 false Chr12: 2644645-2645144 Glycine max
Glyma.12G036200 1.0kb upstream 1.0kb upstream 3306 true Chr12: 2641339-2644644 Glycine max
Glyma.12G036200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 2641339-2642338 Glycine max
Glyma.12G036200 1.0kb downstream 1.0kb downstream 3306 true Chr12: 2642339-2645644 Glycine max
Glyma.12G036200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 2644645-2645644 Glycine max
Glyma.12G036200 2.0kb upstream 2.0kb upstream 4306 true Chr12: 2640339-2644644 Glycine max
Glyma.12G036200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 2640339-2642338 Glycine max
Glyma.12G036200 2.0kb downstream 2.0kb downstream 4306 true Chr12: 2642339-2646644 Glycine max
Glyma.12G036200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 2644645-2646644 Glycine max
Glyma.12G036200 5.0kb upstream 5.0kb upstream 7306 true Chr12: 2637339-2644644 Glycine max
Glyma.12G036200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 2637339-2642338 Glycine max
Glyma.12G036200 5.0kb downstream 5.0kb downstream 7306 true Chr12: 2642339-2649644 Glycine max
Glyma.12G036200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 2644645-2649644 Glycine max
Glyma.12G036200 10.0kb upstream 10.0kb upstream 12306 true Chr12: 2632339-2644644 Glycine max
Glyma.12G036200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 2632339-2642338 Glycine max
Glyma.12G036200 10.0kb downstream 10.0kb downstream 12306 true Chr12: 2642339-2654644 Glycine max
Glyma.12G036200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 2644645-2654644 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306069 5265 Fabidae View MSA
124066894 5270 Rosid View MSA
123745700 5271 Pentapetalae View MSA
122790878 5272 Eudicot View MSA
122046645 5273 Angiosperm View MSA
121350725 5274 Embryophyte View MSA
123425714 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.2027 0.0 37.8909    
cufflinks 6.38823 0.0 17.614    
cufflinks 9.92 0.0 26.6685    
cufflinks 3.34112 0.0 9.89767   Low
cufflinks 17.597 0.0 47.0855   High
cufflinks 10.8956 0.0 29.163    
cufflinks 7.47136 0.0 20.3291    
cufflinks 9.13673 0.0 24.6176    
cufflinks 21.6715 0.0 58.4005 High High
cufflinks 3.7       Low
cufflinks 28.368     High High
cufflinks 5.788        
cufflinks 8.684     High  
cufflinks 9.219     High  
cufflinks 25.58     High High
cufflinks 5.348        
cufflinks 4.434        
cufflinks 4.485        
cufflinks 6.613        
cufflinks 6.276        
cufflinks 16.936     High High
cufflinks 6.211        
cufflinks 6.274        
cufflinks 20.978     High High
cufflinks 6.193        
cufflinks 8.837     High  

0 Strain