Gene : Glyma.12G026600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12550:SF49 - PROTEIN C06A5.3, ISOFORM B Genomic Order:  266
Name:  ? Glyma.12G026600 Secondary Identifier:  ? PAC:30549002
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G026600 0.5kb upstream 0.5kb upstream 15729 true Chr12: 1912765-1928493 Glycine max
Glyma.12G026600 0.5kb upstream 0.5kb upstream 500 false Chr12: 1912765-1913264 Glycine max
Glyma.12G026600 0.5kb downstream 0.5kb downstream 15729 true Chr12: 1913265-1928993 Glycine max
Glyma.12G026600 0.5kb downstream 0.5kb downstream 500 false Chr12: 1928494-1928993 Glycine max
Glyma.12G026600 1.0kb upstream 1.0kb upstream 16229 true Chr12: 1912265-1928493 Glycine max
Glyma.12G026600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 1912265-1913264 Glycine max
Glyma.12G026600 1.0kb downstream 1.0kb downstream 16229 true Chr12: 1913265-1929493 Glycine max
Glyma.12G026600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 1928494-1929493 Glycine max
Glyma.12G026600 2.0kb upstream 2.0kb upstream 17229 true Chr12: 1911265-1928493 Glycine max
Glyma.12G026600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 1911265-1913264 Glycine max
Glyma.12G026600 2.0kb downstream 2.0kb downstream 17229 true Chr12: 1913265-1930493 Glycine max
Glyma.12G026600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 1928494-1930493 Glycine max
Glyma.12G026600 5.0kb upstream 5.0kb upstream 20229 true Chr12: 1908265-1928493 Glycine max
Glyma.12G026600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 1908265-1913264 Glycine max
Glyma.12G026600 5.0kb downstream 5.0kb downstream 20229 true Chr12: 1913265-1933493 Glycine max
Glyma.12G026600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 1928494-1933493 Glycine max
Glyma.12G026600 10.0kb upstream 10.0kb upstream 25229 true Chr12: 1903265-1928493 Glycine max
Glyma.12G026600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 1903265-1913264 Glycine max
Glyma.12G026600 10.0kb downstream 10.0kb downstream 25229 true Chr12: 1913265-1938493 Glycine max
Glyma.12G026600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 1928494-1938493 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307863 5265 Fabidae View MSA
124067114 5270 Rosid View MSA
123746905 5271 Pentapetalae View MSA
122789006 5272 Eudicot View MSA
122042271 5273 Angiosperm View MSA
121348471 5274 Embryophyte View MSA
123424079 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.88808 0.0 15.712   High
cufflinks 3.38226 0.0 9.13212    
cufflinks 6.17496 0.0 16.4894   High
cufflinks 5.46976 0.0 14.5926    
cufflinks 3.39645 0.0 9.17128    
cufflinks 1.9429 0.0 5.47192   Low
cufflinks 4.6866 0.0 12.5236    
cufflinks 3.45409 0.0 9.31377    
cufflinks 3.19181 0.0 8.64285    
cufflinks 1.345       Low
cufflinks 2.283        
cufflinks 2.238        
cufflinks 1.386       Low
cufflinks 1.488       Low
cufflinks 2.679        
cufflinks 2.521        
cufflinks 1.224       Low
cufflinks 2.353        
cufflinks 2.46        
cufflinks 2.977       High
cufflinks 2.272        
cufflinks 2.982       High
cufflinks 2.095        
cufflinks 2.49        
cufflinks 2.689        
cufflinks 1.831        

0 Strain