Gene : Glyma.12G059100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24322:SF354 - TROPINONE REDUCTASE-RELATED Genomic Order:  591
Name:  ? Glyma.12G059100 Secondary Identifier:  ? PAC:30546472
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G059100 0.5kb upstream 0.5kb upstream 2719 true Chr12: 4278315-4281033 Glycine max
Glyma.12G059100 0.5kb upstream 0.5kb upstream 500 false Chr12: 4280534-4281033 Glycine max
Glyma.12G059100 0.5kb downstream 0.5kb downstream 2719 true Chr12: 4277815-4280533 Glycine max
Glyma.12G059100 0.5kb downstream 0.5kb downstream 500 false Chr12: 4277815-4278314 Glycine max
Glyma.12G059100 1.0kb upstream 1.0kb upstream 3219 true Chr12: 4278315-4281533 Glycine max
Glyma.12G059100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 4280534-4281533 Glycine max
Glyma.12G059100 1.0kb downstream 1.0kb downstream 3219 true Chr12: 4277315-4280533 Glycine max
Glyma.12G059100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 4277315-4278314 Glycine max
Glyma.12G059100 2.0kb upstream 2.0kb upstream 4219 true Chr12: 4278315-4282533 Glycine max
Glyma.12G059100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 4280534-4282533 Glycine max
Glyma.12G059100 2.0kb downstream 2.0kb downstream 4219 true Chr12: 4276315-4280533 Glycine max
Glyma.12G059100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 4276315-4278314 Glycine max
Glyma.12G059100 5.0kb upstream 5.0kb upstream 7219 true Chr12: 4278315-4285533 Glycine max
Glyma.12G059100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 4280534-4285533 Glycine max
Glyma.12G059100 5.0kb downstream 5.0kb downstream 7219 true Chr12: 4273315-4280533 Glycine max
Glyma.12G059100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 4273315-4278314 Glycine max
Glyma.12G059100 10.0kb upstream 10.0kb upstream 12219 true Chr12: 4278315-4290533 Glycine max
Glyma.12G059100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 4280534-4290533 Glycine max
Glyma.12G059100 10.0kb downstream 10.0kb downstream 12219 true Chr12: 4268315-4280533 Glycine max
Glyma.12G059100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 4268315-4278314 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305064 5265 Fabidae View MSA
124074747 5270 Rosid View MSA
123753766 5271 Pentapetalae View MSA
122796272 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.0977 0.0 20.7233    
cufflinks 28.1949 0.0 75.2265 High  
cufflinks 184.809 0.0 606.369 High High
cufflinks 1.23495 0.0 4.42277   Low
cufflinks 6.53506 0.0 19.2742    
cufflinks 502.228 0.0 2142.7 High High
cufflinks 1.63079 0.0 5.7335   Low
cufflinks 7.04531 0.0 20.5506    
cufflinks 13.286 0.0 36.3527    
cufflinks 1.734       Low
cufflinks 10.127     High  
cufflinks 48.324     High High
cufflinks 19.424     High  
cufflinks 14.543     High  
cufflinks 1.452       Low
cufflinks 31.106     High  
cufflinks 1.518       Low
cufflinks 2.479       Low
cufflinks 11.59     High  
cufflinks 57.748     High High
cufflinks 3.952        
cufflinks 57.348     High High
cufflinks 45.705     High High
cufflinks 14.675     High  
cufflinks 46.726     High High
cufflinks 6.306     High  

0 Strain