Gene : Glyma.12G059300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24322:SF354 - TROPINONE REDUCTASE-RELATED Genomic Order:  593
Name:  ? Glyma.12G059300 Secondary Identifier:  ? PAC:30547614
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G059300 0.5kb upstream 0.5kb upstream 2727 true Chr12: 4289989-4292715 Glycine max
Glyma.12G059300 0.5kb upstream 0.5kb upstream 500 false Chr12: 4292216-4292715 Glycine max
Glyma.12G059300 0.5kb downstream 0.5kb downstream 2727 true Chr12: 4289489-4292215 Glycine max
Glyma.12G059300 0.5kb downstream 0.5kb downstream 500 false Chr12: 4289489-4289988 Glycine max
Glyma.12G059300 1.0kb upstream 1.0kb upstream 3227 true Chr12: 4289989-4293215 Glycine max
Glyma.12G059300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 4292216-4293215 Glycine max
Glyma.12G059300 1.0kb downstream 1.0kb downstream 3227 true Chr12: 4288989-4292215 Glycine max
Glyma.12G059300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 4288989-4289988 Glycine max
Glyma.12G059300 2.0kb upstream 2.0kb upstream 4227 true Chr12: 4289989-4294215 Glycine max
Glyma.12G059300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 4292216-4294215 Glycine max
Glyma.12G059300 2.0kb downstream 2.0kb downstream 4227 true Chr12: 4287989-4292215 Glycine max
Glyma.12G059300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 4287989-4289988 Glycine max
Glyma.12G059300 5.0kb upstream 5.0kb upstream 7227 true Chr12: 4289989-4297215 Glycine max
Glyma.12G059300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 4292216-4297215 Glycine max
Glyma.12G059300 5.0kb downstream 5.0kb downstream 7227 true Chr12: 4284989-4292215 Glycine max
Glyma.12G059300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 4284989-4289988 Glycine max
Glyma.12G059300 10.0kb upstream 10.0kb upstream 12227 true Chr12: 4289989-4302215 Glycine max
Glyma.12G059300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 4292216-4302215 Glycine max
Glyma.12G059300 10.0kb downstream 10.0kb downstream 12227 true Chr12: 4279989-4292215 Glycine max
Glyma.12G059300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 4279989-4289988 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305064 5265 Fabidae View MSA
124074747 5270 Rosid View MSA
123753766 5271 Pentapetalae View MSA
122796272 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.13961 0.0 4.15941    
cufflinks 1.27658 0.0 4.63154    
cufflinks 3.04306 0.0 10.2248    
cufflinks 0.216799 0.0 0.852658    
cufflinks 1.29435 0.0 4.6847    
cufflinks 0.62153 0.0 2.33887    
cufflinks 0.0195202 0.0 0.0894066 Low Low
cufflinks 0.691951 0.0 2.59248    
cufflinks 2.62206 0.0 8.97605    
cufflinks 0.047     Low Low
cufflinks 0.711        
cufflinks 0.863        
cufflinks 0.348        
cufflinks 0.32        
cufflinks 0.655        
cufflinks 0.196        
cufflinks 0.196        
cufflinks 0.12       Low
cufflinks 1.42       High
cufflinks 0.467        
cufflinks 0.306        
cufflinks 0.227        
cufflinks 0.222        
cufflinks 2.413       High
cufflinks 0.226        
cufflinks 0.367        

0 Strain