Gene : Glyma.12G062300 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR21717:SF9 - PROTEIN TBF1 Genomic Order:  623
Name:  ? Glyma.12G062300 Secondary Identifier:  ? PAC:30548881
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G062300 0.5kb upstream 0.5kb upstream 4937 true Chr12: 4548629-4553565 Glycine max
Glyma.12G062300 0.5kb upstream 0.5kb upstream 500 false Chr12: 4553066-4553565 Glycine max
Glyma.12G062300 0.5kb downstream 0.5kb downstream 4937 true Chr12: 4548129-4553065 Glycine max
Glyma.12G062300 0.5kb downstream 0.5kb downstream 500 false Chr12: 4548129-4548628 Glycine max
Glyma.12G062300 1.0kb upstream 1.0kb upstream 5437 true Chr12: 4548629-4554065 Glycine max
Glyma.12G062300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 4553066-4554065 Glycine max
Glyma.12G062300 1.0kb downstream 1.0kb downstream 5437 true Chr12: 4547629-4553065 Glycine max
Glyma.12G062300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 4547629-4548628 Glycine max
Glyma.12G062300 2.0kb upstream 2.0kb upstream 6437 true Chr12: 4548629-4555065 Glycine max
Glyma.12G062300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 4553066-4555065 Glycine max
Glyma.12G062300 2.0kb downstream 2.0kb downstream 6437 true Chr12: 4546629-4553065 Glycine max
Glyma.12G062300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 4546629-4548628 Glycine max
Glyma.12G062300 5.0kb upstream 5.0kb upstream 9437 true Chr12: 4548629-4558065 Glycine max
Glyma.12G062300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 4553066-4558065 Glycine max
Glyma.12G062300 5.0kb downstream 5.0kb downstream 9437 true Chr12: 4543629-4553065 Glycine max
Glyma.12G062300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 4543629-4548628 Glycine max
Glyma.12G062300 10.0kb upstream 10.0kb upstream 14437 true Chr12: 4548629-4563065 Glycine max
Glyma.12G062300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 4553066-4563065 Glycine max
Glyma.12G062300 10.0kb downstream 10.0kb downstream 14437 true Chr12: 4538629-4553065 Glycine max
Glyma.12G062300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 4538629-4548628 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254943 5265 Fabidae View MSA
124063345 5270 Rosid View MSA
123753061 5271 Pentapetalae View MSA
122788041 5272 Eudicot View MSA
122049318 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121348439 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.73712 0.0 23.7126    
cufflinks 10.4895 0.0 32.6896    
cufflinks 13.9189 0.0 48.0111   High
cufflinks 9.65989 0.0 30.0535    
cufflinks 8.66734 0.0 30.4138    
cufflinks 5.67867 0.0 18.1483   Low
cufflinks 10.122 0.0 30.524    
cufflinks 9.06649 0.0 27.4885    
cufflinks 5.65628 0.0 20.8493   Low
cufflinks 3.56        
cufflinks 0.598       Low
cufflinks 4.023        
cufflinks 4.058        
cufflinks 4.833        
cufflinks 0.878       Low
cufflinks 3.123        
cufflinks 1.459        
cufflinks 5.64       High
cufflinks 5.595       High
cufflinks 2.361        
cufflinks 0.655       Low
cufflinks 3.635        
cufflinks 3.873        
cufflinks 1.257        
cufflinks 2.803        
cufflinks 1.45        

0 Strain