Gene : Glyma.12G099700 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR24073:SF515 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MSD21 Genomic Order:  997
Name:  ? Glyma.12G099700 Secondary Identifier:  ? PAC:30545926
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G099700 0.5kb upstream 0.5kb upstream 4143 true Chr12: 8655669-8659811 Glycine max
Glyma.12G099700 0.5kb upstream 0.5kb upstream 500 false Chr12: 8655669-8656168 Glycine max
Glyma.12G099700 0.5kb downstream 0.5kb downstream 4143 true Chr12: 8656169-8660311 Glycine max
Glyma.12G099700 0.5kb downstream 0.5kb downstream 500 false Chr12: 8659812-8660311 Glycine max
Glyma.12G099700 1.0kb upstream 1.0kb upstream 4643 true Chr12: 8655169-8659811 Glycine max
Glyma.12G099700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 8655169-8656168 Glycine max
Glyma.12G099700 1.0kb downstream 1.0kb downstream 4643 true Chr12: 8656169-8660811 Glycine max
Glyma.12G099700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 8659812-8660811 Glycine max
Glyma.12G099700 2.0kb upstream 2.0kb upstream 5643 true Chr12: 8654169-8659811 Glycine max
Glyma.12G099700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 8654169-8656168 Glycine max
Glyma.12G099700 2.0kb downstream 2.0kb downstream 5643 true Chr12: 8656169-8661811 Glycine max
Glyma.12G099700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 8659812-8661811 Glycine max
Glyma.12G099700 5.0kb upstream 5.0kb upstream 8643 true Chr12: 8651169-8659811 Glycine max
Glyma.12G099700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 8651169-8656168 Glycine max
Glyma.12G099700 5.0kb downstream 5.0kb downstream 8643 true Chr12: 8656169-8664811 Glycine max
Glyma.12G099700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 8659812-8664811 Glycine max
Glyma.12G099700 10.0kb upstream 10.0kb upstream 13643 true Chr12: 8646169-8659811 Glycine max
Glyma.12G099700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 8646169-8656168 Glycine max
Glyma.12G099700 10.0kb downstream 10.0kb downstream 13643 true Chr12: 8656169-8669811 Glycine max
Glyma.12G099700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 8659812-8669811 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029161 5273 Angiosperm View MSA
122312700 5265 Fabidae View MSA
124062930 5270 Rosid View MSA
123753329 5271 Pentapetalae View MSA
122789157 5272 Eudicot View MSA
121298542 5274 Embryophyte View MSA
123336508 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.43883 0.0 4.95549    
cufflinks 1.36898 0.0 4.74035    
cufflinks 20.7234 0.0 55.3053 High High
cufflinks 6.05143 0.0 17.2486    
cufflinks 1.15819 0.0 4.06498    
cufflinks 0.911977 0.0 3.25998    
cufflinks 3.3042 0.0 10.2048    
cufflinks 2.37485 0.0 7.67986    
cufflinks 0.246382 0.0 0.943055 Low Low
cufflinks 0.605        
cufflinks 0.068        
cufflinks 3.802       High
cufflinks 0.131        
cufflinks 0.03     Low Low
cufflinks 0.017     Low Low
cufflinks 0.211        
cufflinks 0.113        
cufflinks 15.931     High High
cufflinks 0.377        
cufflinks 0.315        
cufflinks 0.137        
cufflinks 0.508        
cufflinks 0.306        
cufflinks 0.037     Low Low
cufflinks 0.342        
cufflinks 0.065     Low  

0 Strain