Gene : Glyma.12G108100 G. max Wm82.a2.v1
Defline:  (1 of 4) PF04410 - Gar1/Naf1 RNA binding region (Gar1) Genomic Order:  1081
Name:  ? Glyma.12G108100 Secondary Identifier:  ? PAC:30546227
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G108100 0.5kb upstream 0.5kb upstream 3199 true Chr12: 9922937-9926135 Glycine max
Glyma.12G108100 0.5kb upstream 0.5kb upstream 500 false Chr12: 9925636-9926135 Glycine max
Glyma.12G108100 0.5kb downstream 0.5kb downstream 3199 true Chr12: 9922437-9925635 Glycine max
Glyma.12G108100 0.5kb downstream 0.5kb downstream 500 false Chr12: 9922437-9922936 Glycine max
Glyma.12G108100 1.0kb upstream 1.0kb upstream 3699 true Chr12: 9922937-9926635 Glycine max
Glyma.12G108100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 9925636-9926635 Glycine max
Glyma.12G108100 1.0kb downstream 1.0kb downstream 3699 true Chr12: 9921937-9925635 Glycine max
Glyma.12G108100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 9921937-9922936 Glycine max
Glyma.12G108100 2.0kb upstream 2.0kb upstream 4699 true Chr12: 9922937-9927635 Glycine max
Glyma.12G108100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 9925636-9927635 Glycine max
Glyma.12G108100 2.0kb downstream 2.0kb downstream 4699 true Chr12: 9920937-9925635 Glycine max
Glyma.12G108100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 9920937-9922936 Glycine max
Glyma.12G108100 5.0kb upstream 5.0kb upstream 7699 true Chr12: 9922937-9930635 Glycine max
Glyma.12G108100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 9925636-9930635 Glycine max
Glyma.12G108100 5.0kb downstream 5.0kb downstream 7699 true Chr12: 9917937-9925635 Glycine max
Glyma.12G108100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 9917937-9922936 Glycine max
Glyma.12G108100 10.0kb upstream 10.0kb upstream 12699 true Chr12: 9922937-9935635 Glycine max
Glyma.12G108100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 9925636-9935635 Glycine max
Glyma.12G108100 10.0kb downstream 10.0kb downstream 12699 true Chr12: 9912937-9925635 Glycine max
Glyma.12G108100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 9912937-9922936 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041036 5273 Angiosperm View MSA
122311754 5265 Fabidae View MSA
124065409 5270 Rosid View MSA
123746164 5271 Pentapetalae View MSA
122790588 5272 Eudicot View MSA
121343792 5274 Embryophyte View MSA
123424387 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.45892 0.0 17.7413   High
cufflinks 4.31459 0.0 12.3435    
cufflinks 2.28624 0.0 7.1161   Low
cufflinks 3.18735 0.0 9.44822    
cufflinks 4.17831 0.0 11.9729    
cufflinks 2.86044 0.0 8.61453    
cufflinks 3.75309 0.0 10.9122    
cufflinks 4.5666 0.0 12.9519    
cufflinks 4.52417 0.0 12.8601    
cufflinks 1.779        
cufflinks 1.456        
cufflinks 2.942        
cufflinks 3.515       High
cufflinks 4.745       High
cufflinks 1.428        
cufflinks 2.094        
cufflinks 3.158        
cufflinks 2.344        
cufflinks 4.323       High
cufflinks 1.386        
cufflinks 1.094       Low
cufflinks 1.665        
cufflinks 2.736        
cufflinks 1.096       Low
cufflinks 1.654        
cufflinks 2.491        

0 Strain