Gene : Glyma.12G092200 G. max Wm82.a2.v1
Genomic Order:  922 Name:  ? Glyma.12G092200
Secondary Identifier:  ? PAC:30546686
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G092200 0.5kb upstream 0.5kb upstream 4079 true Chr12: 7544766-7548844 Glycine max
Glyma.12G092200 0.5kb upstream 0.5kb upstream 500 false Chr12: 7544766-7545265 Glycine max
Glyma.12G092200 0.5kb downstream 0.5kb downstream 4079 true Chr12: 7545266-7549344 Glycine max
Glyma.12G092200 0.5kb downstream 0.5kb downstream 500 false Chr12: 7548845-7549344 Glycine max
Glyma.12G092200 1.0kb upstream 1.0kb upstream 4579 true Chr12: 7544266-7548844 Glycine max
Glyma.12G092200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 7544266-7545265 Glycine max
Glyma.12G092200 1.0kb downstream 1.0kb downstream 4579 true Chr12: 7545266-7549844 Glycine max
Glyma.12G092200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 7548845-7549844 Glycine max
Glyma.12G092200 2.0kb upstream 2.0kb upstream 5579 true Chr12: 7543266-7548844 Glycine max
Glyma.12G092200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 7543266-7545265 Glycine max
Glyma.12G092200 2.0kb downstream 2.0kb downstream 5579 true Chr12: 7545266-7550844 Glycine max
Glyma.12G092200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 7548845-7550844 Glycine max
Glyma.12G092200 5.0kb upstream 5.0kb upstream 8579 true Chr12: 7540266-7548844 Glycine max
Glyma.12G092200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 7540266-7545265 Glycine max
Glyma.12G092200 5.0kb downstream 5.0kb downstream 8579 true Chr12: 7545266-7553844 Glycine max
Glyma.12G092200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 7548845-7553844 Glycine max
Glyma.12G092200 10.0kb upstream 10.0kb upstream 13579 true Chr12: 7535266-7548844 Glycine max
Glyma.12G092200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 7535266-7545265 Glycine max
Glyma.12G092200 10.0kb downstream 10.0kb downstream 13579 true Chr12: 7545266-7558844 Glycine max
Glyma.12G092200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 7548845-7558844 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314870 5265 Fabidae View MSA
124071906 5270 Rosid View MSA
123742419 5271 Pentapetalae View MSA
122786965 5272 Eudicot View MSA
122050340 5273 Angiosperm View MSA
121351123 5274 Embryophyte View MSA
123382016 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.22944 0.0 6.8409   Low
cufflinks 6.90916 0.0 25.7313    
cufflinks 3.05888 0.0 13.1971    
cufflinks 5.72017 0.0 22.3264    
cufflinks 14.6465 0.0 52.9126   High
cufflinks 4.52855 0.0 15.7898    
cufflinks 4.39723 0.0 18.2258    
cufflinks 4.44191 0.0 17.8143    
cufflinks 2.76267 0.0 11.1979    
cufflinks 1.951        
cufflinks 1.113        
cufflinks 4.095        
cufflinks 6.622       High
cufflinks 11.81     High High
cufflinks 0.647       Low
cufflinks 2.719        
cufflinks 0.445       Low
cufflinks 4.952        
cufflinks 5.604       High
cufflinks 1.713        
cufflinks 3.083        
cufflinks 2.43        
cufflinks 2.72        
cufflinks 0.888       Low
cufflinks 2.242        
cufflinks 1.87        

0 Strain