Gene : Glyma.12G092300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23088//PTHR23088:SF31 - NITRILASE-RELATED Genomic Order:  923
Name:  ? Glyma.12G092300 Secondary Identifier:  ? PAC:30548365
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ASPARAGINE-DEG1-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G092300 0.5kb upstream 0.5kb upstream 7586 true Chr12: 7550246-7557831 Glycine max
Glyma.12G092300 0.5kb upstream 0.5kb upstream 500 false Chr12: 7557332-7557831 Glycine max
Glyma.12G092300 0.5kb downstream 0.5kb downstream 7586 true Chr12: 7549746-7557331 Glycine max
Glyma.12G092300 0.5kb downstream 0.5kb downstream 500 false Chr12: 7549746-7550245 Glycine max
Glyma.12G092300 1.0kb upstream 1.0kb upstream 8086 true Chr12: 7550246-7558331 Glycine max
Glyma.12G092300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 7557332-7558331 Glycine max
Glyma.12G092300 1.0kb downstream 1.0kb downstream 8086 true Chr12: 7549246-7557331 Glycine max
Glyma.12G092300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 7549246-7550245 Glycine max
Glyma.12G092300 2.0kb upstream 2.0kb upstream 9086 true Chr12: 7550246-7559331 Glycine max
Glyma.12G092300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 7557332-7559331 Glycine max
Glyma.12G092300 2.0kb downstream 2.0kb downstream 9086 true Chr12: 7548246-7557331 Glycine max
Glyma.12G092300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 7548246-7550245 Glycine max
Glyma.12G092300 5.0kb upstream 5.0kb upstream 12086 true Chr12: 7550246-7562331 Glycine max
Glyma.12G092300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 7557332-7562331 Glycine max
Glyma.12G092300 5.0kb downstream 5.0kb downstream 12086 true Chr12: 7545246-7557331 Glycine max
Glyma.12G092300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 7545246-7550245 Glycine max
Glyma.12G092300 10.0kb upstream 10.0kb upstream 17086 true Chr12: 7550246-7567331 Glycine max
Glyma.12G092300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 7557332-7567331 Glycine max
Glyma.12G092300 10.0kb downstream 10.0kb downstream 17086 true Chr12: 7540246-7557331 Glycine max
Glyma.12G092300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 7540246-7550245 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301030 5265 Fabidae View MSA
124063597 5270 Rosid View MSA
123751549 5271 Pentapetalae View MSA
122796633 5272 Eudicot View MSA
122043736 5273 Angiosperm View MSA
121347314 5274 Embryophyte View MSA
123380526 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2678 0.0 35.8216   High
cufflinks 9.55061 0.0 26.38    
cufflinks 15.1899 0.0 40.7844   High
cufflinks 10.0655 0.0 27.658    
cufflinks 5.70012 0.0 16.5886    
cufflinks 5.09197 0.0 15.0384   Low
cufflinks 6.97364 0.0 19.8121    
cufflinks 11.7099 0.0 31.8314    
cufflinks 5.07565 0.0 15.0104   Low
cufflinks 1.925        
cufflinks 1.363        
cufflinks 3.114       High
cufflinks 0.858       Low
cufflinks 0.924       Low
cufflinks 0.67       Low
cufflinks 2.247        
cufflinks 1.256        
cufflinks 2.172        
cufflinks 2.306        
cufflinks 4.222       High
cufflinks 1.832        
cufflinks 3.332       High
cufflinks 1.684        
cufflinks 1.764        
cufflinks 3.177       High
cufflinks 1.498        

0 Strain