Gene : Glyma.12G093300 G. max Wm82.a2.v1
Defline:  (1 of 4) KOG4526 - Predicted membrane protein Genomic Order:  933
Name:  ? Glyma.12G093300 Secondary Identifier:  ? PAC:30547758
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G093300 0.5kb upstream 0.5kb upstream 2375 true Chr12: 7634191-7636565 Glycine max
Glyma.12G093300 0.5kb upstream 0.5kb upstream 500 false Chr12: 7634191-7634690 Glycine max
Glyma.12G093300 0.5kb downstream 0.5kb downstream 2375 true Chr12: 7634691-7637065 Glycine max
Glyma.12G093300 0.5kb downstream 0.5kb downstream 500 false Chr12: 7636566-7637065 Glycine max
Glyma.12G093300 1.0kb upstream 1.0kb upstream 2875 true Chr12: 7633691-7636565 Glycine max
Glyma.12G093300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 7633691-7634690 Glycine max
Glyma.12G093300 1.0kb downstream 1.0kb downstream 2875 true Chr12: 7634691-7637565 Glycine max
Glyma.12G093300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 7636566-7637565 Glycine max
Glyma.12G093300 2.0kb upstream 2.0kb upstream 3875 true Chr12: 7632691-7636565 Glycine max
Glyma.12G093300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 7632691-7634690 Glycine max
Glyma.12G093300 2.0kb downstream 2.0kb downstream 3875 true Chr12: 7634691-7638565 Glycine max
Glyma.12G093300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 7636566-7638565 Glycine max
Glyma.12G093300 5.0kb upstream 5.0kb upstream 6875 true Chr12: 7629691-7636565 Glycine max
Glyma.12G093300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 7629691-7634690 Glycine max
Glyma.12G093300 5.0kb downstream 5.0kb downstream 6875 true Chr12: 7634691-7641565 Glycine max
Glyma.12G093300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 7636566-7641565 Glycine max
Glyma.12G093300 10.0kb upstream 10.0kb upstream 11875 true Chr12: 7624691-7636565 Glycine max
Glyma.12G093300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 7624691-7634690 Glycine max
Glyma.12G093300 10.0kb downstream 10.0kb downstream 11875 true Chr12: 7634691-7646565 Glycine max
Glyma.12G093300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 7636566-7646565 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307335 5265 Fabidae View MSA
124066079 5270 Rosid View MSA
123739162 5271 Pentapetalae View MSA
122786877 5272 Eudicot View MSA
122046265 5273 Angiosperm View MSA
121346382 5274 Embryophyte View MSA
123424955 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.0445 0.0 194.55 High High
cufflinks 20.017 0.0 71.5236    
cufflinks 14.3428 0.0 54.704    
cufflinks 9.50013 0.0 34.6471    
cufflinks 6.55106 0.0 20.5445   Low
cufflinks 8.91801 0.0 38.1161    
cufflinks 15.6378 0.0 50.5247    
cufflinks 18.5531 0.0 58.1003    
cufflinks 5.9401 0.0 19.492   Low
cufflinks 3.924        
cufflinks 1.674        
cufflinks 4.574        
cufflinks 0.783       Low
cufflinks 0.408       Low
cufflinks 1.074        
cufflinks 7.919     High High
cufflinks 2.383        
cufflinks 4.236        
cufflinks 3.564        
cufflinks 11.44     High High
cufflinks 1.178        
cufflinks 10.418     High High
cufflinks 7.257        
cufflinks 1.552        
cufflinks 10.072     High High
cufflinks 1.483        

0 Strain