Gene : Glyma.12G093400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR12081//PTHR12081:SF47 - TRANSCRIPTION FACTOR E2F Genomic Order:  934
Name:  ? Glyma.12G093400 Secondary Identifier:  ? PAC:30547361
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G093400 0.5kb upstream 0.5kb upstream 6529 true Chr12: 7636643-7643171 Glycine max
Glyma.12G093400 0.5kb upstream 0.5kb upstream 500 false Chr12: 7642672-7643171 Glycine max
Glyma.12G093400 0.5kb downstream 0.5kb downstream 6529 true Chr12: 7636143-7642671 Glycine max
Glyma.12G093400 0.5kb downstream 0.5kb downstream 500 false Chr12: 7636143-7636642 Glycine max
Glyma.12G093400 1.0kb upstream 1.0kb upstream 7029 true Chr12: 7636643-7643671 Glycine max
Glyma.12G093400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 7642672-7643671 Glycine max
Glyma.12G093400 1.0kb downstream 1.0kb downstream 7029 true Chr12: 7635643-7642671 Glycine max
Glyma.12G093400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 7635643-7636642 Glycine max
Glyma.12G093400 2.0kb upstream 2.0kb upstream 8029 true Chr12: 7636643-7644671 Glycine max
Glyma.12G093400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 7642672-7644671 Glycine max
Glyma.12G093400 2.0kb downstream 2.0kb downstream 8029 true Chr12: 7634643-7642671 Glycine max
Glyma.12G093400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 7634643-7636642 Glycine max
Glyma.12G093400 5.0kb upstream 5.0kb upstream 11029 true Chr12: 7636643-7647671 Glycine max
Glyma.12G093400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 7642672-7647671 Glycine max
Glyma.12G093400 5.0kb downstream 5.0kb downstream 11029 true Chr12: 7631643-7642671 Glycine max
Glyma.12G093400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 7631643-7636642 Glycine max
Glyma.12G093400 10.0kb upstream 10.0kb upstream 16029 true Chr12: 7636643-7652671 Glycine max
Glyma.12G093400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 7642672-7652671 Glycine max
Glyma.12G093400 10.0kb downstream 10.0kb downstream 16029 true Chr12: 7626643-7642671 Glycine max
Glyma.12G093400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 7626643-7636642 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304266 5265 Fabidae View MSA
124067172 5270 Rosid View MSA
123739560 5271 Pentapetalae View MSA
122789212 5272 Eudicot View MSA
122042305 5273 Angiosperm View MSA
121345510 5274 Embryophyte View MSA
123428750 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.11964 0.0 19.8863    
cufflinks 4.2869 0.0 17.6755    
cufflinks 6.7523 0.0 24.7916   High
cufflinks 4.466 0.0 18.1429    
cufflinks 3.47385 0.0 15.0983    
cufflinks 3.66614 0.0 13.3414    
cufflinks 3.43973 0.0 15.1466   Low
cufflinks 4.33606 0.0 17.6749    
cufflinks 3.8294 0.0 16.0472    
cufflinks 0.311       Low
cufflinks 0.815       High
cufflinks 0.512        
cufflinks 0.363       Low
cufflinks 0.319       Low
cufflinks 0.711       High
cufflinks 0.469        
cufflinks 0.458        
cufflinks 0.533        
cufflinks 0.786       High
cufflinks 0.355       Low
cufflinks 0.663        
cufflinks 0.423        
cufflinks 0.573        
cufflinks 0.822       High
cufflinks 0.386        
cufflinks 0.642        

0 Strain