Gene : Glyma.12G095000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22849:SF0 - WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  950
Name:  ? Glyma.12G095000 Secondary Identifier:  ? PAC:30549039
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G095000 0.5kb upstream 0.5kb upstream 1715 true Chr12: 7915272-7916986 Glycine max
Glyma.12G095000 0.5kb upstream 0.5kb upstream 500 false Chr12: 7915272-7915771 Glycine max
Glyma.12G095000 0.5kb downstream 0.5kb downstream 1715 true Chr12: 7915772-7917486 Glycine max
Glyma.12G095000 0.5kb downstream 0.5kb downstream 500 false Chr12: 7916987-7917486 Glycine max
Glyma.12G095000 1.0kb upstream 1.0kb upstream 2215 true Chr12: 7914772-7916986 Glycine max
Glyma.12G095000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 7914772-7915771 Glycine max
Glyma.12G095000 1.0kb downstream 1.0kb downstream 2215 true Chr12: 7915772-7917986 Glycine max
Glyma.12G095000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 7916987-7917986 Glycine max
Glyma.12G095000 2.0kb upstream 2.0kb upstream 3215 true Chr12: 7913772-7916986 Glycine max
Glyma.12G095000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 7913772-7915771 Glycine max
Glyma.12G095000 2.0kb downstream 2.0kb downstream 3215 true Chr12: 7915772-7918986 Glycine max
Glyma.12G095000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 7916987-7918986 Glycine max
Glyma.12G095000 5.0kb upstream 5.0kb upstream 6215 true Chr12: 7910772-7916986 Glycine max
Glyma.12G095000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 7910772-7915771 Glycine max
Glyma.12G095000 5.0kb downstream 5.0kb downstream 6215 true Chr12: 7915772-7921986 Glycine max
Glyma.12G095000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 7916987-7921986 Glycine max
Glyma.12G095000 10.0kb upstream 10.0kb upstream 11215 true Chr12: 7905772-7916986 Glycine max
Glyma.12G095000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 7905772-7915771 Glycine max
Glyma.12G095000 10.0kb downstream 10.0kb downstream 11215 true Chr12: 7915772-7926986 Glycine max
Glyma.12G095000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 7916987-7926986 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310390 5265 Fabidae View MSA
124070283 5270 Rosid View MSA
123752134 5271 Pentapetalae View MSA
122795209 5272 Eudicot View MSA
122048631 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.015104 0.0 0.0693906 Low  
cufflinks 0.0328875 0.0 0.14094 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0169004 0.0 0.0764905 Low  
cufflinks 0.0175453 0.0 0.0793572 Low  
cufflinks 0.239        
cufflinks 0.077        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.049     Low  
cufflinks 7.433     High High
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.317        
cufflinks 0.009     Low Low
cufflinks 0.046     Low  
cufflinks 0.156        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.002       High

0 Strain