Gene : Glyma.12G089000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10766:SF60 - SYNTAXIN OF PLANT 111 Genomic Order:  890
Name:  ? Glyma.12G089000 Secondary Identifier:  ? PAC:30547167
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G089000 0.5kb upstream 0.5kb upstream 4769 true Chr12: 7291245-7296013 Glycine max
Glyma.12G089000 0.5kb upstream 0.5kb upstream 500 false Chr12: 7291245-7291744 Glycine max
Glyma.12G089000 0.5kb downstream 0.5kb downstream 4769 true Chr12: 7291745-7296513 Glycine max
Glyma.12G089000 0.5kb downstream 0.5kb downstream 500 false Chr12: 7296014-7296513 Glycine max
Glyma.12G089000 1.0kb upstream 1.0kb upstream 5269 true Chr12: 7290745-7296013 Glycine max
Glyma.12G089000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 7290745-7291744 Glycine max
Glyma.12G089000 1.0kb downstream 1.0kb downstream 5269 true Chr12: 7291745-7297013 Glycine max
Glyma.12G089000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 7296014-7297013 Glycine max
Glyma.12G089000 2.0kb upstream 2.0kb upstream 6269 true Chr12: 7289745-7296013 Glycine max
Glyma.12G089000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 7289745-7291744 Glycine max
Glyma.12G089000 2.0kb downstream 2.0kb downstream 6269 true Chr12: 7291745-7298013 Glycine max
Glyma.12G089000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 7296014-7298013 Glycine max
Glyma.12G089000 5.0kb upstream 5.0kb upstream 9269 true Chr12: 7286745-7296013 Glycine max
Glyma.12G089000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 7286745-7291744 Glycine max
Glyma.12G089000 5.0kb downstream 5.0kb downstream 9269 true Chr12: 7291745-7301013 Glycine max
Glyma.12G089000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 7296014-7301013 Glycine max
Glyma.12G089000 10.0kb upstream 10.0kb upstream 14269 true Chr12: 7281745-7296013 Glycine max
Glyma.12G089000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 7281745-7291744 Glycine max
Glyma.12G089000 10.0kb downstream 10.0kb downstream 14269 true Chr12: 7291745-7306013 Glycine max
Glyma.12G089000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 7296014-7306013 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792052 5273 Angiosperm View MSA
122302492 5265 Fabidae View MSA
124067275 5270 Rosid View MSA
123741376 5271 Pentapetalae View MSA
122796121 5272 Eudicot View MSA
121063308 5274 Embryophyte View MSA
123103068 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.41401 0.0 27.3889   Low
cufflinks 11.1744 0.0 39.7041    
cufflinks 6.12873 0.0 19.9456   Low
cufflinks 12.6528 0.0 44.645    
cufflinks 10.6866 0.0 38.1742    
cufflinks 13.2823 0.0 46.7318    
cufflinks 19.609 0.0 68.7347   High
cufflinks 10.582 0.0 37.4191    
cufflinks 9.66214 0.0 34.2432    
cufflinks 2.528        
cufflinks 0.358       Low
cufflinks 2.128        
cufflinks 2.951       High
cufflinks 4.104       High
cufflinks 0.347       Low
cufflinks 1.169        
cufflinks 0.754        
cufflinks 2.933       High
cufflinks 2.496        
cufflinks 1.325        
cufflinks 0.449       Low
cufflinks 1.361        
cufflinks 1.37        
cufflinks 0.652        
cufflinks 1.16        
cufflinks 0.724        

0 Strain