Gene : Glyma.12G089700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13803//PTHR13803:SF10 - SEC24-RELATED PROTEIN Genomic Order:  897
Name:  ? Glyma.12G089700 Secondary Identifier:  ? PAC:30547316
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G089700 0.5kb upstream 0.5kb upstream 10927 true Chr12: 7364256-7375182 Glycine max
Glyma.12G089700 0.5kb upstream 0.5kb upstream 500 false Chr12: 7374683-7375182 Glycine max
Glyma.12G089700 0.5kb downstream 0.5kb downstream 10927 true Chr12: 7363756-7374682 Glycine max
Glyma.12G089700 0.5kb downstream 0.5kb downstream 500 false Chr12: 7363756-7364255 Glycine max
Glyma.12G089700 1.0kb upstream 1.0kb upstream 11427 true Chr12: 7364256-7375682 Glycine max
Glyma.12G089700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 7374683-7375682 Glycine max
Glyma.12G089700 1.0kb downstream 1.0kb downstream 11427 true Chr12: 7363256-7374682 Glycine max
Glyma.12G089700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 7363256-7364255 Glycine max
Glyma.12G089700 2.0kb upstream 2.0kb upstream 12427 true Chr12: 7364256-7376682 Glycine max
Glyma.12G089700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 7374683-7376682 Glycine max
Glyma.12G089700 2.0kb downstream 2.0kb downstream 12427 true Chr12: 7362256-7374682 Glycine max
Glyma.12G089700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 7362256-7364255 Glycine max
Glyma.12G089700 5.0kb upstream 5.0kb upstream 15427 true Chr12: 7364256-7379682 Glycine max
Glyma.12G089700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 7374683-7379682 Glycine max
Glyma.12G089700 5.0kb downstream 5.0kb downstream 15427 true Chr12: 7359256-7374682 Glycine max
Glyma.12G089700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 7359256-7364255 Glycine max
Glyma.12G089700 10.0kb upstream 10.0kb upstream 20427 true Chr12: 7364256-7384682 Glycine max
Glyma.12G089700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 7374683-7384682 Glycine max
Glyma.12G089700 10.0kb downstream 10.0kb downstream 20427 true Chr12: 7354256-7374682 Glycine max
Glyma.12G089700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 7354256-7364255 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301861 5265 Fabidae View MSA
124064119 5270 Rosid View MSA
123740907 5271 Pentapetalae View MSA
122789020 5272 Eudicot View MSA
122042222 5273 Angiosperm View MSA
121345983 5274 Embryophyte View MSA
123428151 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.15531 0.0 24.5141    
cufflinks 6.38558 0.0 17.384   Low
cufflinks 7.26917 0.0 19.634    
cufflinks 8.8603 0.0 23.7473    
cufflinks 9.99387 0.0 26.6996   High
cufflinks 8.00495 0.0 21.5162    
cufflinks 8.83682 0.0 23.6817    
cufflinks 7.72851 0.0 20.8122    
cufflinks 7.28536 0.0 19.6695    
cufflinks 1.689        
cufflinks 1.058       Low
cufflinks 1.546        
cufflinks 2.521       High
cufflinks 2.776       High
cufflinks 1.504        
cufflinks 2.025        
cufflinks 1.57        
cufflinks 1.842        
cufflinks 2.133        
cufflinks 2.027        
cufflinks 1.16       Low
cufflinks 2.009        
cufflinks 1.882        
cufflinks 1.309       Low
cufflinks 1.817        
cufflinks 1.345        

0 Strain