Gene : Glyma.12G082300 G. max Wm82.a2.v1
Defline:  (1 of 3) KOG3484 - Cyclin-dependent protein kinase CDC28, regulatory subunit CKS1, and related proteins Genomic Order:  823
Name:  ? Glyma.12G082300 Secondary Identifier:  ? PAC:30546845
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G082300 0.5kb upstream 0.5kb upstream 2100 true Chr12: 6515173-6517272 Glycine max
Glyma.12G082300 0.5kb upstream 0.5kb upstream 500 false Chr12: 6516773-6517272 Glycine max
Glyma.12G082300 0.5kb downstream 0.5kb downstream 2100 true Chr12: 6514673-6516772 Glycine max
Glyma.12G082300 0.5kb downstream 0.5kb downstream 500 false Chr12: 6514673-6515172 Glycine max
Glyma.12G082300 1.0kb upstream 1.0kb upstream 2600 true Chr12: 6515173-6517772 Glycine max
Glyma.12G082300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 6516773-6517772 Glycine max
Glyma.12G082300 1.0kb downstream 1.0kb downstream 2600 true Chr12: 6514173-6516772 Glycine max
Glyma.12G082300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 6514173-6515172 Glycine max
Glyma.12G082300 2.0kb upstream 2.0kb upstream 3600 true Chr12: 6515173-6518772 Glycine max
Glyma.12G082300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 6516773-6518772 Glycine max
Glyma.12G082300 2.0kb downstream 2.0kb downstream 3600 true Chr12: 6513173-6516772 Glycine max
Glyma.12G082300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 6513173-6515172 Glycine max
Glyma.12G082300 5.0kb upstream 5.0kb upstream 6600 true Chr12: 6515173-6521772 Glycine max
Glyma.12G082300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 6516773-6521772 Glycine max
Glyma.12G082300 5.0kb downstream 5.0kb downstream 6600 true Chr12: 6510173-6516772 Glycine max
Glyma.12G082300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 6510173-6515172 Glycine max
Glyma.12G082300 10.0kb upstream 10.0kb upstream 11600 true Chr12: 6515173-6526772 Glycine max
Glyma.12G082300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 6516773-6526772 Glycine max
Glyma.12G082300 10.0kb downstream 10.0kb downstream 11600 true Chr12: 6505173-6516772 Glycine max
Glyma.12G082300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 6505173-6515172 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304336 5265 Fabidae View MSA
124061080 5270 Rosid View MSA
123739192 5271 Pentapetalae View MSA
122791805 5272 Eudicot View MSA
122049124 5273 Angiosperm View MSA
121351366 5274 Embryophyte View MSA
123427674 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.4413 0.0 88.0024 High Low
cufflinks 53.4709 0.0 185.527 High  
cufflinks 41.2243 0.0 145.134 High  
cufflinks 42.0521 0.0 145.412 High  
cufflinks 59.9396 0.0 207.385 High  
cufflinks 59.7905 0.0 180.35 High  
cufflinks 56.4201 0.0 196.022 High  
cufflinks 70.42 0.0 245.37 High High
cufflinks 52.0188 0.0 180.794 High  
cufflinks 11.176     High  
cufflinks 4.364       Low
cufflinks 9.076     High  
cufflinks 13.29     High High
cufflinks 16.883     High High
cufflinks 2.708       Low
cufflinks 8.49     High  
cufflinks 7.43     High  
cufflinks 9.484     High  
cufflinks 14.171     High High
cufflinks 6.653        
cufflinks 5.124        
cufflinks 8.93     High  
cufflinks 13.202     High High
cufflinks 6.133     High  
cufflinks 7.713     High  
cufflinks 5.809        

0 Strain