Gene : Glyma.12G139000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR24064:SF292 - ORGANIC CATION/CARNITINE TRANSPORTER 4 Genomic Order:  1390
Name:  ? Glyma.12G139000 Secondary Identifier:  ? PAC:30546949
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G139000 0.5kb upstream 0.5kb upstream 5892 true Chr12: 16936719-16942610 Glycine max
Glyma.12G139000 0.5kb upstream 0.5kb upstream 500 false Chr12: 16936719-16937218 Glycine max
Glyma.12G139000 0.5kb downstream 0.5kb downstream 5892 true Chr12: 16937219-16943110 Glycine max
Glyma.12G139000 0.5kb downstream 0.5kb downstream 500 false Chr12: 16942611-16943110 Glycine max
Glyma.12G139000 1.0kb upstream 1.0kb upstream 6392 true Chr12: 16936219-16942610 Glycine max
Glyma.12G139000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 16936219-16937218 Glycine max
Glyma.12G139000 1.0kb downstream 1.0kb downstream 6392 true Chr12: 16937219-16943610 Glycine max
Glyma.12G139000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 16942611-16943610 Glycine max
Glyma.12G139000 2.0kb upstream 2.0kb upstream 7392 true Chr12: 16935219-16942610 Glycine max
Glyma.12G139000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 16935219-16937218 Glycine max
Glyma.12G139000 2.0kb downstream 2.0kb downstream 7392 true Chr12: 16937219-16944610 Glycine max
Glyma.12G139000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 16942611-16944610 Glycine max
Glyma.12G139000 5.0kb upstream 5.0kb upstream 10392 true Chr12: 16932219-16942610 Glycine max
Glyma.12G139000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 16932219-16937218 Glycine max
Glyma.12G139000 5.0kb downstream 5.0kb downstream 10392 true Chr12: 16937219-16947610 Glycine max
Glyma.12G139000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 16942611-16947610 Glycine max
Glyma.12G139000 10.0kb upstream 10.0kb upstream 15392 true Chr12: 16927219-16942610 Glycine max
Glyma.12G139000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 16927219-16937218 Glycine max
Glyma.12G139000 10.0kb downstream 10.0kb downstream 15392 true Chr12: 16937219-16952610 Glycine max
Glyma.12G139000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 16942611-16952610 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312179 5265 Fabidae View MSA
124068982 5270 Rosid View MSA
123739056 5271 Pentapetalae View MSA
122792351 5272 Eudicot View MSA
122045653 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121351070 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0524099 0.0 0.213821 Low  
cufflinks 0.0806391 0.0 0.323464 Low  
cufflinks 0.0143893 0.0 0.0645684 Low  
cufflinks 0.241645 0.0 0.922102    
cufflinks 0.0462896 0.0 0.189257 Low  
cufflinks 6.10448 0.0 17.2708   High
cufflinks 0.0262726 0.0 0.112032 Low  
cufflinks 0.0127521 0.0 0.0576776 Low  
cufflinks 0.027     Low  
cufflinks 0.022     Low  
cufflinks 0.053     Low High
cufflinks 0.009     Low  
cufflinks 0.098       High
cufflinks 0.018     Low  
cufflinks 0.031     Low  
cufflinks 0.005     Low Low
cufflinks 0.14       High
cufflinks 0.017     Low  
cufflinks 0.036     Low  
cufflinks 0.011     Low  
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.019     Low  
cufflinks 0.007     Low Low

0 Strain