Gene : Glyma.12G146600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR24006:SF449 - PROTEIN C48D1.1, ISOFORM A-RELATED Genomic Order:  1466
Name:  ? Glyma.12G146600 Secondary Identifier:  ? PAC:30546460
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G146600 0.5kb upstream 0.5kb upstream 15711 true Chr12: 20215507-20231217 Glycine max
Glyma.12G146600 0.5kb upstream 0.5kb upstream 500 false Chr12: 20215507-20216006 Glycine max
Glyma.12G146600 0.5kb downstream 0.5kb downstream 15711 true Chr12: 20216007-20231717 Glycine max
Glyma.12G146600 0.5kb downstream 0.5kb downstream 500 false Chr12: 20231218-20231717 Glycine max
Glyma.12G146600 1.0kb upstream 1.0kb upstream 16211 true Chr12: 20215007-20231217 Glycine max
Glyma.12G146600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 20215007-20216006 Glycine max
Glyma.12G146600 1.0kb downstream 1.0kb downstream 16211 true Chr12: 20216007-20232217 Glycine max
Glyma.12G146600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 20231218-20232217 Glycine max
Glyma.12G146600 2.0kb upstream 2.0kb upstream 17211 true Chr12: 20214007-20231217 Glycine max
Glyma.12G146600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 20214007-20216006 Glycine max
Glyma.12G146600 2.0kb downstream 2.0kb downstream 17211 true Chr12: 20216007-20233217 Glycine max
Glyma.12G146600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 20231218-20233217 Glycine max
Glyma.12G146600 5.0kb upstream 5.0kb upstream 20211 true Chr12: 20211007-20231217 Glycine max
Glyma.12G146600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 20211007-20216006 Glycine max
Glyma.12G146600 5.0kb downstream 5.0kb downstream 20211 true Chr12: 20216007-20236217 Glycine max
Glyma.12G146600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 20231218-20236217 Glycine max
Glyma.12G146600 10.0kb upstream 10.0kb upstream 25211 true Chr12: 20206007-20231217 Glycine max
Glyma.12G146600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 20206007-20216006 Glycine max
Glyma.12G146600 10.0kb downstream 10.0kb downstream 25211 true Chr12: 20216007-20241217 Glycine max
Glyma.12G146600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 20231218-20241217 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300245 5265 Fabidae View MSA
124064180 5270 Rosid View MSA
123745589 5271 Pentapetalae View MSA
122786484 5272 Eudicot View MSA
122048085 5273 Angiosperm View MSA
121345286 5274 Embryophyte View MSA
123424236 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.7077 0.0 56.6845    
cufflinks 22.8801 0.0 63.171 High High
cufflinks 20.4574 0.0 56.047 High  
cufflinks 20.5909 0.0 56.4275 High  
cufflinks 19.6346 0.0 53.524    
cufflinks 17.2308 0.0 46.6174   Low
cufflinks 18.751 0.0 50.9264    
cufflinks 18.8789 0.0 51.3897    
cufflinks 19.7952 0.0 54.0217 High  
cufflinks 4.689        
cufflinks 1.856       Low
cufflinks 4.277        
cufflinks 6.002       High
cufflinks 6.427       High
cufflinks 2.223       Low
cufflinks 4.542        
cufflinks 2.773        
cufflinks 4.868        
cufflinks 5.785       High
cufflinks 4.316        
cufflinks 2.628       Low
cufflinks 4.835        
cufflinks 4.521        
cufflinks 2.288       Low
cufflinks 4.194        
cufflinks 3.977        

0 Strain