Gene : Glyma.12G135200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13048 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 Genomic Order:  1352
Name:  ? Glyma.12G135200 Secondary Identifier:  ? PAC:30547126
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G135200 0.5kb upstream 0.5kb upstream 9452 true Chr12: 15702298-15711749 Glycine max
Glyma.12G135200 0.5kb upstream 0.5kb upstream 500 false Chr12: 15702298-15702797 Glycine max
Glyma.12G135200 0.5kb downstream 0.5kb downstream 9452 true Chr12: 15702798-15712249 Glycine max
Glyma.12G135200 0.5kb downstream 0.5kb downstream 500 false Chr12: 15711750-15712249 Glycine max
Glyma.12G135200 1.0kb upstream 1.0kb upstream 9952 true Chr12: 15701798-15711749 Glycine max
Glyma.12G135200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 15701798-15702797 Glycine max
Glyma.12G135200 1.0kb downstream 1.0kb downstream 9952 true Chr12: 15702798-15712749 Glycine max
Glyma.12G135200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 15711750-15712749 Glycine max
Glyma.12G135200 2.0kb upstream 2.0kb upstream 10952 true Chr12: 15700798-15711749 Glycine max
Glyma.12G135200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 15700798-15702797 Glycine max
Glyma.12G135200 2.0kb downstream 2.0kb downstream 10952 true Chr12: 15702798-15713749 Glycine max
Glyma.12G135200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 15711750-15713749 Glycine max
Glyma.12G135200 5.0kb upstream 5.0kb upstream 13952 true Chr12: 15697798-15711749 Glycine max
Glyma.12G135200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 15697798-15702797 Glycine max
Glyma.12G135200 5.0kb downstream 5.0kb downstream 13952 true Chr12: 15702798-15716749 Glycine max
Glyma.12G135200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 15711750-15716749 Glycine max
Glyma.12G135200 10.0kb upstream 10.0kb upstream 18952 true Chr12: 15692798-15711749 Glycine max
Glyma.12G135200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 15692798-15702797 Glycine max
Glyma.12G135200 10.0kb downstream 10.0kb downstream 18952 true Chr12: 15702798-15721749 Glycine max
Glyma.12G135200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 15711750-15721749 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305865 5265 Fabidae View MSA
124061574 5270 Rosid View MSA
123738457 5271 Pentapetalae View MSA
122793674 5272 Eudicot View MSA
122046284 5273 Angiosperm View MSA
121345634 5274 Embryophyte View MSA
123425946 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.8464 0.0 90.6377 High Low
cufflinks 44.8111 0.0 119.554 High  
cufflinks 37.9037 0.0 101.226 High  
cufflinks 35.4941 0.0 94.9191 High Low
cufflinks 60.3288 0.0 161.797 High  
cufflinks 77.5185 0.0 210.305 High High
cufflinks 57.6816 0.0 154.358 High  
cufflinks 65.6544 0.0 176.66 High  
cufflinks 47.6249 0.0 127.11 High  
cufflinks 4.644       High
cufflinks 1.187       Low
cufflinks 2.486        
cufflinks 4.971       High
cufflinks 5.887       High
cufflinks 0.942       Low
cufflinks 3.222        
cufflinks 2.548        
cufflinks 3.471        
cufflinks 3.079        
cufflinks 3.327        
cufflinks 1.824        
cufflinks 3.246        
cufflinks 2.904        
cufflinks 1.578       Low
cufflinks 3.378        
cufflinks 2.029        

0 Strain