Gene : Glyma.12G173700 G. max Wm82.a2.v1
Defline:  (1 of 3) PF01301//PF02140//PF02837 - Glycosyl hydrolases family 35 (Glyco_hydro_35) // Galactose binding lectin domain (Gal_Lectin) // Glycosyl hydrolases family 2, sugar binding domain (Glyco_hydro_2_N) Genomic Order:  1737
Name:  ? Glyma.12G173700 Secondary Identifier:  ? PAC:30546542
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G173700 0.5kb upstream 0.5kb upstream 8425 true Chr12: 33046449-33054873 Glycine max
Glyma.12G173700 0.5kb upstream 0.5kb upstream 500 false Chr12: 33054374-33054873 Glycine max
Glyma.12G173700 0.5kb downstream 0.5kb downstream 8425 true Chr12: 33045949-33054373 Glycine max
Glyma.12G173700 0.5kb downstream 0.5kb downstream 500 false Chr12: 33045949-33046448 Glycine max
Glyma.12G173700 1.0kb upstream 1.0kb upstream 8925 true Chr12: 33046449-33055373 Glycine max
Glyma.12G173700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 33054374-33055373 Glycine max
Glyma.12G173700 1.0kb downstream 1.0kb downstream 8925 true Chr12: 33045449-33054373 Glycine max
Glyma.12G173700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 33045449-33046448 Glycine max
Glyma.12G173700 2.0kb upstream 2.0kb upstream 9925 true Chr12: 33046449-33056373 Glycine max
Glyma.12G173700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 33054374-33056373 Glycine max
Glyma.12G173700 2.0kb downstream 2.0kb downstream 9925 true Chr12: 33044449-33054373 Glycine max
Glyma.12G173700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 33044449-33046448 Glycine max
Glyma.12G173700 5.0kb upstream 5.0kb upstream 12925 true Chr12: 33046449-33059373 Glycine max
Glyma.12G173700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 33054374-33059373 Glycine max
Glyma.12G173700 5.0kb downstream 5.0kb downstream 12925 true Chr12: 33041449-33054373 Glycine max
Glyma.12G173700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 33041449-33046448 Glycine max
Glyma.12G173700 10.0kb upstream 10.0kb upstream 17925 true Chr12: 33046449-33064373 Glycine max
Glyma.12G173700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 33054374-33064373 Glycine max
Glyma.12G173700 10.0kb downstream 10.0kb downstream 17925 true Chr12: 33036449-33054373 Glycine max
Glyma.12G173700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 33036449-33046448 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311106 5265 Fabidae View MSA
124062631 5270 Rosid View MSA
123748046 5271 Pentapetalae View MSA
122793808 5272 Eudicot View MSA
122044858 5273 Angiosperm View MSA
121350261 5274 Embryophyte View MSA
123428653 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.263762 0.0 0.962695    
cufflinks 0.349136 0.0 1.25113    
cufflinks 0.736951 0.0 2.45435    
cufflinks 84.2237 0.0 308.48 High High
cufflinks 0.721025 0.0 2.42101    
cufflinks 0.0860628 0.0 0.331224 Low Low
cufflinks 49.1194 0.0 157.717 High High
cufflinks 0.276722 0.0 1.00594    
cufflinks 0.389603 0.0 1.38506    
cufflinks 0.603        
cufflinks 0.011     Low Low
cufflinks 0.272        
cufflinks 0.447        
cufflinks 0.279        
cufflinks 0.412        
cufflinks 0.563        
cufflinks 0.076        
cufflinks 0.381        
cufflinks 0.612        
cufflinks 0.351        
cufflinks 0.039     Low Low
cufflinks 0.465        
cufflinks 0.33        
cufflinks 0.003     Low Low
cufflinks 0.37        
cufflinks 0.094        

0 Strain