Gene : Glyma.12G174000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12634:SF8 - PROTEIN SAPS-1, ISOFORM C Genomic Order:  1740
Name:  ? Glyma.12G174000 Secondary Identifier:  ? PAC:30546388
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G174000 0.5kb upstream 0.5kb upstream 9418 true Chr12: 33101647-33111064 Glycine max
Glyma.12G174000 0.5kb upstream 0.5kb upstream 500 false Chr12: 33101647-33102146 Glycine max
Glyma.12G174000 0.5kb downstream 0.5kb downstream 9418 true Chr12: 33102147-33111564 Glycine max
Glyma.12G174000 0.5kb downstream 0.5kb downstream 500 false Chr12: 33111065-33111564 Glycine max
Glyma.12G174000 1.0kb upstream 1.0kb upstream 9918 true Chr12: 33101147-33111064 Glycine max
Glyma.12G174000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 33101147-33102146 Glycine max
Glyma.12G174000 1.0kb downstream 1.0kb downstream 9918 true Chr12: 33102147-33112064 Glycine max
Glyma.12G174000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 33111065-33112064 Glycine max
Glyma.12G174000 2.0kb upstream 2.0kb upstream 10918 true Chr12: 33100147-33111064 Glycine max
Glyma.12G174000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 33100147-33102146 Glycine max
Glyma.12G174000 2.0kb downstream 2.0kb downstream 10918 true Chr12: 33102147-33113064 Glycine max
Glyma.12G174000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 33111065-33113064 Glycine max
Glyma.12G174000 5.0kb upstream 5.0kb upstream 13918 true Chr12: 33097147-33111064 Glycine max
Glyma.12G174000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 33097147-33102146 Glycine max
Glyma.12G174000 5.0kb downstream 5.0kb downstream 13918 true Chr12: 33102147-33116064 Glycine max
Glyma.12G174000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 33111065-33116064 Glycine max
Glyma.12G174000 10.0kb upstream 10.0kb upstream 18918 true Chr12: 33092147-33111064 Glycine max
Glyma.12G174000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 33092147-33102146 Glycine max
Glyma.12G174000 10.0kb downstream 10.0kb downstream 18918 true Chr12: 33102147-33121064 Glycine max
Glyma.12G174000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 33111065-33121064 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312894 5265 Fabidae View MSA
124069403 5270 Rosid View MSA
123742234 5271 Pentapetalae View MSA
122794805 5272 Eudicot View MSA
122051052 5273 Angiosperm View MSA
121347725 5274 Embryophyte View MSA
123428189 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.2257 0.0 55.2659   High
cufflinks 13.1825 0.0 35.2837    
cufflinks 14.8385 0.0 39.9152    
cufflinks 14.2901 0.0 38.3449    
cufflinks 14.1862 0.0 38.0261    
cufflinks 11.0739 0.0 29.5511   Low
cufflinks 17.2091 0.0 46.4826    
cufflinks 16.6468 0.0 44.9945    
cufflinks 13.5048 0.0 36.1675    
cufflinks 5.939        
cufflinks 5.129       Low
cufflinks 5.791        
cufflinks 6.243        
cufflinks 6.986     High  
cufflinks 5.235     High Low
cufflinks 6.991        
cufflinks 5.766        
cufflinks 6.896        
cufflinks 6.972        
cufflinks 7.605     High High
cufflinks 5.827     High  
cufflinks 7.633     High High
cufflinks 6.845        
cufflinks 6.873     High  
cufflinks 7.424     High High
cufflinks 5.58       Low

0 Strain