Gene : Glyma.12G174900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31223:SF23 - CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG1 Genomic Order:  1749
Name:  ? Glyma.12G174900 Secondary Identifier:  ? PAC:30548407
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G174900 0.5kb upstream 0.5kb upstream 5774 true Chr12: 33225421-33231194 Glycine max
Glyma.12G174900 0.5kb upstream 0.5kb upstream 500 false Chr12: 33230695-33231194 Glycine max
Glyma.12G174900 0.5kb downstream 0.5kb downstream 5774 true Chr12: 33224921-33230694 Glycine max
Glyma.12G174900 0.5kb downstream 0.5kb downstream 500 false Chr12: 33224921-33225420 Glycine max
Glyma.12G174900 1.0kb upstream 1.0kb upstream 6274 true Chr12: 33225421-33231694 Glycine max
Glyma.12G174900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 33230695-33231694 Glycine max
Glyma.12G174900 1.0kb downstream 1.0kb downstream 6274 true Chr12: 33224421-33230694 Glycine max
Glyma.12G174900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 33224421-33225420 Glycine max
Glyma.12G174900 2.0kb upstream 2.0kb upstream 7274 true Chr12: 33225421-33232694 Glycine max
Glyma.12G174900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 33230695-33232694 Glycine max
Glyma.12G174900 2.0kb downstream 2.0kb downstream 7274 true Chr12: 33223421-33230694 Glycine max
Glyma.12G174900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 33223421-33225420 Glycine max
Glyma.12G174900 5.0kb upstream 5.0kb upstream 10274 true Chr12: 33225421-33235694 Glycine max
Glyma.12G174900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 33230695-33235694 Glycine max
Glyma.12G174900 5.0kb downstream 5.0kb downstream 10274 true Chr12: 33220421-33230694 Glycine max
Glyma.12G174900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 33220421-33225420 Glycine max
Glyma.12G174900 10.0kb upstream 10.0kb upstream 15274 true Chr12: 33225421-33240694 Glycine max
Glyma.12G174900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 33230695-33240694 Glycine max
Glyma.12G174900 10.0kb downstream 10.0kb downstream 15274 true Chr12: 33215421-33230694 Glycine max
Glyma.12G174900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 33215421-33225420 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315121 5265 Fabidae View MSA
124062112 5270 Rosid View MSA
123753527 5271 Pentapetalae View MSA
122796499 5272 Eudicot View MSA
122046742 5273 Angiosperm View MSA
121351757 5274 Embryophyte View MSA
123427506 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.23799 0.0 26.2296    
cufflinks 10.377 0.0 29.111   High
cufflinks 17.9259 0.0 48.1994   High
cufflinks 3.15965 0.0 10.3488    
cufflinks 0.11227 0.0 0.449635 Low Low
cufflinks 0.31985 0.0 1.23098    
cufflinks 0.0527982 0.0 0.219719 Low Low
cufflinks 1.29827 0.0 4.64966    
cufflinks 0.236443 0.0 0.921754 Low  
cufflinks 0.133        
cufflinks 0.011     Low Low
cufflinks 5.277       High
cufflinks 0.006     Low Low
cufflinks 0.021     Low  
cufflinks 0.014     Low  
cufflinks 3.051        
cufflinks 0.056     Low  
cufflinks 1.876        
cufflinks 2.661        
cufflinks 3.241       High
cufflinks 0.003     Low Low
cufflinks 2.973        
cufflinks 2.828        
cufflinks 0.014     Low  
cufflinks 3.524       High
cufflinks 0.01     Low Low

0 Strain