Gene : Glyma.12G168400 G. max Wm82.a2.v1
Defline:  (1 of 25) PF06293 - Lipopolysaccharide kinase (Kdo/WaaP) family (Kdo) Genomic Order:  1684
Name:  ? Glyma.12G168400 Secondary Identifier:  ? PAC:30545741
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G168400 0.5kb upstream 0.5kb upstream 1968 true Chr12: 32329569-32331536 Glycine max
Glyma.12G168400 0.5kb upstream 0.5kb upstream 500 false Chr12: 32329569-32330068 Glycine max
Glyma.12G168400 0.5kb downstream 0.5kb downstream 1968 true Chr12: 32330069-32332036 Glycine max
Glyma.12G168400 0.5kb downstream 0.5kb downstream 500 false Chr12: 32331537-32332036 Glycine max
Glyma.12G168400 1.0kb upstream 1.0kb upstream 2468 true Chr12: 32329069-32331536 Glycine max
Glyma.12G168400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 32329069-32330068 Glycine max
Glyma.12G168400 1.0kb downstream 1.0kb downstream 2468 true Chr12: 32330069-32332536 Glycine max
Glyma.12G168400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 32331537-32332536 Glycine max
Glyma.12G168400 2.0kb upstream 2.0kb upstream 3468 true Chr12: 32328069-32331536 Glycine max
Glyma.12G168400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 32328069-32330068 Glycine max
Glyma.12G168400 2.0kb downstream 2.0kb downstream 3468 true Chr12: 32330069-32333536 Glycine max
Glyma.12G168400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 32331537-32333536 Glycine max
Glyma.12G168400 5.0kb upstream 5.0kb upstream 6468 true Chr12: 32325069-32331536 Glycine max
Glyma.12G168400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 32325069-32330068 Glycine max
Glyma.12G168400 5.0kb downstream 5.0kb downstream 6468 true Chr12: 32330069-32336536 Glycine max
Glyma.12G168400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 32331537-32336536 Glycine max
Glyma.12G168400 10.0kb upstream 10.0kb upstream 11468 true Chr12: 32320069-32331536 Glycine max
Glyma.12G168400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 32320069-32330068 Glycine max
Glyma.12G168400 10.0kb downstream 10.0kb downstream 11468 true Chr12: 32330069-32341536 Glycine max
Glyma.12G168400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 32331537-32341536 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305316 5265 Fabidae View MSA
124060601 5270 Rosid View MSA
123738079 5271 Pentapetalae View MSA
122769911 5272 Eudicot View MSA
122049911 5273 Angiosperm View MSA
121349712 5274 Embryophyte View MSA
123381410 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.23117 0.0 4.36372   High
cufflinks 0.806407 0.0 2.9417    
cufflinks 0.419833 0.0 1.58168   Low
cufflinks 0.530041 0.0 1.97568    
cufflinks 1.56548 0.0 5.43311   High
cufflinks 0.632703 0.0 2.33738    
cufflinks 0.647493 0.0 2.38887    
cufflinks 0.517542 0.0 1.93061    
cufflinks 1.1553 0.0 4.11121    
cufflinks 1.456       High
cufflinks 0.531        
cufflinks 0.362        
cufflinks 2.242       High
cufflinks 2.124       High
cufflinks 0.025     Low Low
cufflinks 0.411        
cufflinks 0.292        
cufflinks 0.415        
cufflinks 0.278        
cufflinks 0.613        
cufflinks 0.676        
cufflinks 0.68        
cufflinks 0.505        
cufflinks 0.526        
cufflinks 0.33        
cufflinks 0.528        

0 Strain