Gene : Glyma.12G159300 G. max Wm82.a2.v1
Defline:  (1 of 12) 1.1.1.37 - Malate dehydrogenase / Malic dehydrogenase Genomic Order:  1593
Name:  ? Glyma.12G159300 Secondary Identifier:  ? PAC:30548136
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLUCONEO-PWY Glycine max pathologic  
Gmax GLYOXYLATE-BYPASS Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-5690 Glycine max pathologic  
Gmax PWY-7115 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G159300 0.5kb upstream 0.5kb upstream 4466 true Chr12: 27787400-27791865 Glycine max
Glyma.12G159300 0.5kb upstream 0.5kb upstream 500 false Chr12: 27791366-27791865 Glycine max
Glyma.12G159300 0.5kb downstream 0.5kb downstream 4466 true Chr12: 27786900-27791365 Glycine max
Glyma.12G159300 0.5kb downstream 0.5kb downstream 500 false Chr12: 27786900-27787399 Glycine max
Glyma.12G159300 1.0kb upstream 1.0kb upstream 4966 true Chr12: 27787400-27792365 Glycine max
Glyma.12G159300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 27791366-27792365 Glycine max
Glyma.12G159300 1.0kb downstream 1.0kb downstream 4966 true Chr12: 27786400-27791365 Glycine max
Glyma.12G159300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 27786400-27787399 Glycine max
Glyma.12G159300 2.0kb upstream 2.0kb upstream 5966 true Chr12: 27787400-27793365 Glycine max
Glyma.12G159300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 27791366-27793365 Glycine max
Glyma.12G159300 2.0kb downstream 2.0kb downstream 5966 true Chr12: 27785400-27791365 Glycine max
Glyma.12G159300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 27785400-27787399 Glycine max
Glyma.12G159300 5.0kb upstream 5.0kb upstream 8966 true Chr12: 27787400-27796365 Glycine max
Glyma.12G159300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 27791366-27796365 Glycine max
Glyma.12G159300 5.0kb downstream 5.0kb downstream 8966 true Chr12: 27782400-27791365 Glycine max
Glyma.12G159300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 27782400-27787399 Glycine max
Glyma.12G159300 10.0kb upstream 10.0kb upstream 13966 true Chr12: 27787400-27801365 Glycine max
Glyma.12G159300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 27791366-27801365 Glycine max
Glyma.12G159300 10.0kb downstream 10.0kb downstream 13966 true Chr12: 27777400-27791365 Glycine max
Glyma.12G159300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 27777400-27787399 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300495 5265 Fabidae View MSA
124072115 5270 Rosid View MSA
123744980 5271 Pentapetalae View MSA
122794194 5272 Eudicot View MSA
122042635 5273 Angiosperm View MSA
121345492 5274 Embryophyte View MSA
123423974 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 147.552 0.0 480.845 High  
cufflinks 163.283 0.0 541.978 High  
cufflinks 45.4096 0.0 124.664 High Low
cufflinks 144.348 0.0 467.546 High  
cufflinks 281.962 0.0 1085.63 High High
cufflinks 136.32 0.0 438.767 High  
cufflinks 159.769 0.0 529.876 High  
cufflinks 135.287 0.0 433.463 High  
cufflinks 200.285 0.0 700.806 High  
cufflinks 78.39     High High
cufflinks 6.591     High Low
cufflinks 28.929     High  
cufflinks 100.166     High High
cufflinks 135.86     High High
cufflinks 26.436     High  
cufflinks 32.949     High  
cufflinks 21.555     High  
cufflinks 52.986     High  
cufflinks 61.278     High  
cufflinks 24.632     High  
cufflinks 12.587     High Low
cufflinks 28.146     High  
cufflinks 42.696     High  
cufflinks 10.442     High Low
cufflinks 26.962     High  
cufflinks 18.609     High  

0 Strain