Gene : Glyma.12G150500 G. max Wm82.a2.v1
Defline:  (1 of 12) PTHR11772//PTHR11772:SF14 - ASPARAGINE SYNTHETASE Genomic Order:  1505
Name:  ? Glyma.12G150500 Secondary Identifier:  ? PAC:30546431
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G150500 0.5kb upstream 0.5kb upstream 2813 true Chr12: 21612166-21614978 Glycine max
Glyma.12G150500 0.5kb upstream 0.5kb upstream 500 false Chr12: 21614479-21614978 Glycine max
Glyma.12G150500 0.5kb downstream 0.5kb downstream 2813 true Chr12: 21611666-21614478 Glycine max
Glyma.12G150500 0.5kb downstream 0.5kb downstream 500 false Chr12: 21611666-21612165 Glycine max
Glyma.12G150500 1.0kb upstream 1.0kb upstream 3313 true Chr12: 21612166-21615478 Glycine max
Glyma.12G150500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 21614479-21615478 Glycine max
Glyma.12G150500 1.0kb downstream 1.0kb downstream 3313 true Chr12: 21611166-21614478 Glycine max
Glyma.12G150500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 21611166-21612165 Glycine max
Glyma.12G150500 2.0kb upstream 2.0kb upstream 4313 true Chr12: 21612166-21616478 Glycine max
Glyma.12G150500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 21614479-21616478 Glycine max
Glyma.12G150500 2.0kb downstream 2.0kb downstream 4313 true Chr12: 21610166-21614478 Glycine max
Glyma.12G150500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 21610166-21612165 Glycine max
Glyma.12G150500 5.0kb upstream 5.0kb upstream 7313 true Chr12: 21612166-21619478 Glycine max
Glyma.12G150500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 21614479-21619478 Glycine max
Glyma.12G150500 5.0kb downstream 5.0kb downstream 7313 true Chr12: 21607166-21614478 Glycine max
Glyma.12G150500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 21607166-21612165 Glycine max
Glyma.12G150500 10.0kb upstream 10.0kb upstream 12313 true Chr12: 21612166-21624478 Glycine max
Glyma.12G150500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 21614479-21624478 Glycine max
Glyma.12G150500 10.0kb downstream 10.0kb downstream 12313 true Chr12: 21602166-21614478 Glycine max
Glyma.12G150500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 21602166-21612165 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122240073 5265 Fabidae Singleton cluster - no MSA
124072477 5270 Rosid View MSA
123746642 5271 Pentapetalae View MSA
122787862 5272 Eudicot View MSA
122046778 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.51517 0.0 17.0734    
cufflinks 5.02994 0.0 15.767    
cufflinks 5.72325 0.0 17.525    
cufflinks 1.19365 0.0 4.33719   Low
cufflinks 29.0093 0.0 77.4469 High High
cufflinks 4.55567 0.0 14.4738    
cufflinks 37.2709 0.0 99.548 High High
cufflinks 2.48872 0.0 8.53371    
cufflinks 21.4157 0.0 57.5985 High  
cufflinks 0.694       Low
cufflinks 237.747     High High
cufflinks 3.239        
cufflinks 2.39        
cufflinks 5.699        
cufflinks 618.596     High High
cufflinks 60.692     High  
cufflinks 4.746        
cufflinks 0.963       Low
cufflinks 2.207       Low
cufflinks 81.425     High  
cufflinks 239.214     High High
cufflinks 24.828     High  
cufflinks 6.917        
cufflinks 73.488     High  
cufflinks 94.064     High  
cufflinks 88.478     High  

0 Strain