Gene : Glyma.12G198600 G. max Wm82.a2.v1
Defline:  (1 of 7) PF00069//PF00954//PF01453//PF08276 - Protein kinase domain (Pkinase) // S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // PAN-like domain (PAN_2) Genomic Order:  1986
Name:  ? Glyma.12G198600 Secondary Identifier:  ? PAC:30546815
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G198600 0.5kb upstream 0.5kb upstream 3483 true Chr12: 35997153-36000635 Glycine max
Glyma.12G198600 0.5kb upstream 0.5kb upstream 500 false Chr12: 35997153-35997652 Glycine max
Glyma.12G198600 0.5kb downstream 0.5kb downstream 3483 true Chr12: 35997653-36001135 Glycine max
Glyma.12G198600 0.5kb downstream 0.5kb downstream 500 false Chr12: 36000636-36001135 Glycine max
Glyma.12G198600 1.0kb upstream 1.0kb upstream 3983 true Chr12: 35996653-36000635 Glycine max
Glyma.12G198600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 35996653-35997652 Glycine max
Glyma.12G198600 1.0kb downstream 1.0kb downstream 3983 true Chr12: 35997653-36001635 Glycine max
Glyma.12G198600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 36000636-36001635 Glycine max
Glyma.12G198600 2.0kb upstream 2.0kb upstream 4983 true Chr12: 35995653-36000635 Glycine max
Glyma.12G198600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 35995653-35997652 Glycine max
Glyma.12G198600 2.0kb downstream 2.0kb downstream 4983 true Chr12: 35997653-36002635 Glycine max
Glyma.12G198600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 36000636-36002635 Glycine max
Glyma.12G198600 5.0kb upstream 5.0kb upstream 7983 true Chr12: 35992653-36000635 Glycine max
Glyma.12G198600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 35992653-35997652 Glycine max
Glyma.12G198600 5.0kb downstream 5.0kb downstream 7983 true Chr12: 35997653-36005635 Glycine max
Glyma.12G198600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 36000636-36005635 Glycine max
Glyma.12G198600 10.0kb upstream 10.0kb upstream 12983 true Chr12: 35987653-36000635 Glycine max
Glyma.12G198600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 35987653-35997652 Glycine max
Glyma.12G198600 10.0kb downstream 10.0kb downstream 12983 true Chr12: 35997653-36010635 Glycine max
Glyma.12G198600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 36000636-36010635 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310372 5265 Fabidae View MSA
124073959 5270 Rosid View MSA
123747551 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.58931 0.0 25.8506   High
cufflinks 0.975405 0.0 3.66443    
cufflinks 2.56691 0.0 9.42992    
cufflinks 2.10196 0.0 9.67703    
cufflinks 0.583671 0.0 3.37609    
cufflinks 2.79785 0.0 10.0602    
cufflinks 0.986512 0.0 3.65389    
cufflinks 2.15043 0.0 8.28989    
cufflinks 0.273211 0.0 1.32724   Low
cufflinks 0.918        
cufflinks 0.134       Low
cufflinks 1.388        
cufflinks 0.14       Low
cufflinks 0.115       Low
cufflinks 0.027     Low Low
cufflinks 3.517        
cufflinks 2.21        
cufflinks 3.337        
cufflinks 0.68        
cufflinks 5.103       High
cufflinks 0.214        
cufflinks 4.773       High
cufflinks 2.923        
cufflinks 0.363        
cufflinks 4.156       High
cufflinks 0.249        

0 Strain