Gene : Glyma.12G202200 G. max Wm82.a2.v1
Defline:  (1 of 4) 2.8.1.8 - Lipoyl synthase / Lipoate synthase Genomic Order:  2022
Name:  ? Glyma.12G202200 Secondary Identifier:  ? PAC:30547132
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-501 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G202200 0.5kb upstream 0.5kb upstream 4486 true Chr12: 36267099-36271584 Glycine max
Glyma.12G202200 0.5kb upstream 0.5kb upstream 500 false Chr12: 36267099-36267598 Glycine max
Glyma.12G202200 0.5kb downstream 0.5kb downstream 4486 true Chr12: 36267599-36272084 Glycine max
Glyma.12G202200 0.5kb downstream 0.5kb downstream 500 false Chr12: 36271585-36272084 Glycine max
Glyma.12G202200 1.0kb upstream 1.0kb upstream 4986 true Chr12: 36266599-36271584 Glycine max
Glyma.12G202200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 36266599-36267598 Glycine max
Glyma.12G202200 1.0kb downstream 1.0kb downstream 4986 true Chr12: 36267599-36272584 Glycine max
Glyma.12G202200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 36271585-36272584 Glycine max
Glyma.12G202200 2.0kb upstream 2.0kb upstream 5986 true Chr12: 36265599-36271584 Glycine max
Glyma.12G202200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 36265599-36267598 Glycine max
Glyma.12G202200 2.0kb downstream 2.0kb downstream 5986 true Chr12: 36267599-36273584 Glycine max
Glyma.12G202200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 36271585-36273584 Glycine max
Glyma.12G202200 5.0kb upstream 5.0kb upstream 8986 true Chr12: 36262599-36271584 Glycine max
Glyma.12G202200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 36262599-36267598 Glycine max
Glyma.12G202200 5.0kb downstream 5.0kb downstream 8986 true Chr12: 36267599-36276584 Glycine max
Glyma.12G202200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 36271585-36276584 Glycine max
Glyma.12G202200 10.0kb upstream 10.0kb upstream 13986 true Chr12: 36257599-36271584 Glycine max
Glyma.12G202200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 36257599-36267598 Glycine max
Glyma.12G202200 10.0kb downstream 10.0kb downstream 13986 true Chr12: 36267599-36281584 Glycine max
Glyma.12G202200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 36271585-36281584 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309062 5265 Fabidae View MSA
124060481 5270 Rosid View MSA
123740164 5271 Pentapetalae View MSA
122788424 5272 Eudicot View MSA
122045804 5273 Angiosperm View MSA
121345971 5274 Embryophyte View MSA
123424868 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.8257 0.0 42.2855   High
cufflinks 9.01089 0.0 24.7548    
cufflinks 11.7025 0.0 31.6307    
cufflinks 9.34743 0.0 25.5979    
cufflinks 10.5333 0.0 28.5375    
cufflinks 21.6011 0.0 57.6926   High
cufflinks 7.31597 0.0 20.4174   Low
cufflinks 12.4153 0.0 33.4421    
cufflinks 10.5901 0.0 28.7355    
cufflinks 4.936        
cufflinks 5.883     High  
cufflinks 3.813        
cufflinks 4.967        
cufflinks 4.644        
cufflinks 5.134        
cufflinks 5.919        
cufflinks 2.471       Low
cufflinks 3.564       Low
cufflinks 4.242        
cufflinks 7.094     High High
cufflinks 5.624        
cufflinks 6.247        
cufflinks 5.337        
cufflinks 5.115        
cufflinks 6.486       High
cufflinks 3.713       Low

0 Strain